RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 DMC1Q14565 340 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 USP39Q53GS9 565 aaKnown RBP17.65■□□□□ 0.42
CLK3-223ENST00000568488 PIGKQ92643 395 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 CHFRQ96EP1 664 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 GCNAQ96QF7 691 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 FAM83CQ9BQN1 747 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 OXCT2Q9BYC2 517 aaPredicted RBP17.65■□□□□ 0.42
CLK3-223ENST00000568488 CNTN3Q9P232 1028 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 TUBGCP4Q9UGJ1 667 aa17.65■□□□□ 0.42
CLK3-223ENST00000568488 SPAARA0A1B0GVQ0 90 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 MEFVO15553 781 aaPredicted RBP17.64■□□□□ 0.41
CLK3-223ENST00000568488 OAZ2O95190 189 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 SEC24BO95487 1268 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 MAPK8P45983 427 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 DHPSP49366 369 aaPredicted RBP17.64■□□□□ 0.41
CLK3-223ENST00000568488 CDR1P51861 262 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 PMS2CLQ68D20 193 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 SYT13Q7L8C5 426 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 TMEM130Q8N3G9 435 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 TTC9BQ8N6N2 239 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
CLK3-223ENST00000568488 MTMR9Q96QG7 549 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 P2RY13Q9BPV8 354 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 POLR3CQ9BUI4 534 aaPredicted RBP17.64■□□□□ 0.41
CLK3-223ENST00000568488 TARS2Q9BW92 718 aaKnown RBP17.64■□□□□ 0.41
CLK3-223ENST00000568488 SLC46A2Q9BY10 475 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 MRPL4Q9BYD3 311 aaKnown RBP17.64■□□□□ 0.41
CLK3-223ENST00000568488 TPSD1Q9BZJ3 242 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 BRMS1Q9HCU9 246 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 EBF1Q9UH73 591 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 CYP46A1Q9Y6A2 500 aa17.64■□□□□ 0.41
CLK3-223ENST00000568488 MTMR11A4FU01 709 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 OR6C75A6NL08 312 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 MCF2P10911 925 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 ARSAP15289 507 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 WEE1P30291 646 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 SIM1P81133 766 aaPredicted RBP17.63■□□□□ 0.41
CLK3-223ENST00000568488 TAF12Q16514 161 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 FBXO43Q4G163 708 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 SOWAHCQ53LP3 525 aaPredicted RBP17.63■□□□□ 0.41
CLK3-223ENST00000568488 NAIF1Q69YI7 327 aaPredicted RBP17.63■□□□□ 0.41
CLK3-223ENST00000568488 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 DSTYKQ6XUX3 929 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 EXOC4Q96A65 974 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 SEPT5Q99719 369 aaPredicted RBP17.63■□□□□ 0.41
CLK3-223ENST00000568488 LPIN3Q9BQK8 851 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 ZSWIM6Q9HCJ5 1215 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 PTPRHQ9HD43 1115 aa17.63■□□□□ 0.41
CLK3-223ENST00000568488 SETXQ7Z333 2677 aaKnown RBP17.63■□□□□ 0.41
CLK3-223ENST00000568488 M0QZQ0 153 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 WNT7AO00755 349 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 CDC25CP30307 473 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 RDXP35241 583 aaKnown RBP17.62■□□□□ 0.41
CLK3-223ENST00000568488 AVPR1AP37288 418 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 SPAG1Q07617 926 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 SCRN1Q12765 414 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 BFSP1Q12934 665 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 VEPH1Q14D04 833 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 SEZ6Q53EL9 994 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 CC2D1AQ6P1N0 951 aaPredicted RBP17.62■□□□□ 0.41
CLK3-223ENST00000568488 C11orf74Q86VG3 221 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 CMTM8Q8IZV2 173 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 TSTD1Q8NFU3 115 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 ACDQ96AP0 544 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 CCL26Q9Y258 94 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 NUP210Q8TEM1 1887 aaPredicted RBP17.62■□□□□ 0.41
CLK3-223ENST00000568488 GCN1Q92616 2671 aaKnown RBP17.62■□□□□ 0.41
CLK3-223ENST00000568488 ABCA7Q8IZY2 2146 aa17.62■□□□□ 0.41
CLK3-223ENST00000568488 ITPR1Q14643 2758 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 LAMA5O15230 3695 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 BCKDHBP21953 392 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 PEX3P56589 373 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 LMAN2Q12907 356 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 SLC10A6Q3KNW5 377 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 TRIM61Q5EBN2 209 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 OVOS1Q6IE37 1185 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 PDZD3Q86UT5 571 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 TTC30AQ86WT1 665 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 CHCHD4Q8N4Q1 142 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 MAB21L3Q8N8X9 362 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 TTC16Q8NEE8 873 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 ERMNQ8TAM6 284 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 GIPC2Q8TF65 315 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 TNFRSF25Q93038 417 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 ZBTB45Q96K62 511 aaPredicted RBP17.61■□□□□ 0.41
CLK3-223ENST00000568488 NUSAP1Q9BXS6 441 aaKnown RBP17.61■□□□□ 0.41
CLK3-223ENST00000568488 TMEM60Q9H2L4 133 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
CLK3-223ENST00000568488 PHLPP2Q6ZVD8 1323 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 STK36Q9NRP7 1315 aa17.61■□□□□ 0.41
CLK3-223ENST00000568488 NUP205Q92621 2012 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 GJA4P35212 333 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 NPTX2P47972 431 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 MYBPC2Q14324 1141 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 MGAT5BQ3V5L5 792 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 MPZL3Q6UWV2 235 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 PROSER1Q86XN7 944 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 CD101Q93033 1021 aa17.6■□□□□ 0.41
CLK3-223ENST00000568488 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms