RNA–Protein interactions for RNA: ENST00000568423.5

SCAMP5-218, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 3

Gene SCAMP5, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-218ENST00000568423 ITGB3P05106 788 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 PSMC2P35998 433 aaKnown RBP19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 NUBP1P53384 320 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 STX17P56962 302 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 CLDN10P78369 228 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 RAB33AQ14088 237 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 C1orf220Q5T0J3 134 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 IER5LQ5T953 404 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 SCARA3Q6AZY7 606 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 RTL10Q7L3V2 364 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 TMC2Q8TDI7 906 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 BORCS6Q96GS4 357 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 ANKRD36BP1Q96IX9 119 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 FNBP1Q96RU3 617 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 EPS15L1Q9UBC2 864 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 MTRRQ9UBK8 725 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 RWDD2AQ9UIY3 292 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 BACE2Q9Y5Z0 518 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 CDY1Q9Y6F8 540 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 DENND4AQ7Z401 1863 aa19.28■□□□□ 0.68
SCAMP5-218ENST00000568423 H7C4K7 107 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 SPTLC1O15269 473 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 FSHRP23945 695 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 TKTP29401 623 aaKnown RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 POLR2BP30876 1174 aaKnown RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 HOXA9P31269 272 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 ELF1P32519 619 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 MCCD1P59942 119 aaPredicted RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 DLG4P78352 724 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 BFSP1Q12934 665 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 INTS8Q75QN2 995 aaKnown RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 GET4Q7L5D6 327 aaPredicted RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 CACTINQ8WUQ7 758 aaKnown RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 ZNF516Q92618 1163 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 SUSD3Q96L08 255 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 CEP63Q96MT8 703 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 SMOC2Q9H3U7 446 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 DUSP12Q9UNI6 340 aa19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 ZFP37Q9Y6Q3 630 aaPredicted RBP19.27■□□□□ 0.68
SCAMP5-218ENST00000568423 TULP1O00294 542 aaPredicted RBP19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 SYN3O14994 580 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 PDGFBP01127 241 aaPredicted RBP19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 TNNC2P02585 160 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 EPB41P11171 864 aaKnown RBP19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 TNNI1P19237 187 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 ENPEPQ07075 957 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 DUOXA2Q1HG44 320 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 GRASPQ7Z6J2 395 aaPredicted RBP19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 ALYREFQ86V81 257 aaKnown RBP19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 LRRC52Q8N7C0 313 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 SLC7A14Q8TBB6 771 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 SYAP1Q96A49 352 aaPredicted RBP19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 MYADMQ96S97 322 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 WDFY4Q6ZS81 3184 aa19.26■□□□□ 0.67
SCAMP5-218ENST00000568423 M0QZQ0 153 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 CCL16O15467 120 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 ADAM12O43184 909 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 N4BP1O75113 896 aaKnown RBP19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 TRIM49P0CI25 452 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 TRIM49CP0CI26 452 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 LAMP2P13473 410 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 RFX1P22670 979 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 VAMP7P51809 220 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 VCPP55072 806 aaKnown RBP19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 LILRA4P59901 499 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 TDRD10Q5VZ19 366 aaKnown RBP19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 TRAPPC11Q7Z392 1133 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 CSGALNACT2Q8N6G5 542 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 APPL2Q8NEU8 664 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 FLCNQ8NFG4 579 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 ZNF560Q96MR9 790 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 DACH1Q9UI36 760 aa19.25■□□□□ 0.67
SCAMP5-218ENST00000568423 STK25O00506 426 aa19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 TAF6P49848 677 aa19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 CLCN5P51795 746 aa19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 VARS2Q5ST30 1063 aaKnown RBP19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 ASTLQ6HA08 431 aaPredicted RBP19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 PRSS33Q8NF86 280 aa19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 PCDHB8Q9UN66 801 aa19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 AGAP1Q9UPQ3 857 aa19.24■□□□□ 0.67
SCAMP5-218ENST00000568423 KRT13P13646 458 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 PAX3P23760 479 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 ERCC5P28715 1186 aaPredicted RBP19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 PNPLA4P41247 253 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 MRE11P49959 708 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 AP3M2P53677 418 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 ARPP19P56211 112 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 PPP3CAQ08209 521 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 STX1AQ16623 288 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 ZACNQ401N2 412 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 SV2CQ496J9 727 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 C11orf57Q6ZUT1 292 aaPredicted RBP19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 USP37Q86T82 979 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 SLC44A3Q8N4M1 653 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 ZNF461Q8TAF7 563 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 RSAD2Q8WXG1 361 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 CDH7Q9ULB5 785 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 PIEZO1Q92508 2521 aa19.23■□□□□ 0.67
SCAMP5-218ENST00000568423 PRRG1O14668 218 aa19.22■□□□□ 0.67
SCAMP5-218ENST00000568423 IKBKBO14920 756 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms