RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	LEO1	Q8WVC0	666 aa	Predicted RBP	7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	FGF14	Q92915	247 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	TCEAL4	Q96EI5	215 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	BORCS6	Q96GS4	357 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SPATA32	Q96LK8	384 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	PGLYRP2	Q96PD5	576 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	RTP3	Q9BQQ7	232 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	BLZF1	Q9H2G9	400 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	HSFX1	Q9UBD0	423 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	USP25	Q9UHP3	1055 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SERTAD1	Q9UHV2	236 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	ITGA11	Q9UKX5	1188 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	CA14	Q9ULX7	337 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	AGAP1	Q9UPQ3	857 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	SLC27A5	Q9Y2P5	690 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	ASB3	Q9Y575	518 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	ATP6V1D	Q9Y5K8	247 aa		7.46	□□□□□ -1.22
SF3B3-209	ENST00000567635	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635		A0A1B0GVL5	298 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	MTMR11	A4FU01	709 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	TGFB1I1	O43294	461 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	GALR2	O43603	387 aa	Predicted RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	PI15	O43692	258 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	HUS1	O60921	280 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ECI2	O75521	394 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	TNNC2	P02585	160 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ITGB3	P05106	788 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	TMEM191B	P0C7N4	346 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	MYL4	P12829	197 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	CEBPB	P17676	345 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	AOC1	P19801	751 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	RFX1	P22670	979 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	CASP1	P29466	404 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	POLR2B	P30876	1174 aa	Known RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ANP32A	P39687	249 aa	Known RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	CCR2	P41597	374 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	EPHA5	P54756	1037 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	EHHADH	Q08426	723 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	TCF15	Q12870	199 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	BFSP1	Q12934	665 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	CUL4B	Q13620	913 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	SLC39A12	Q504Y0	691 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	SLC44A4	Q53GD3	710 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	PRSS36	Q5K4E3	855 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	PHLDB3	Q6NSJ2	640 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	LRRTM3	Q86VH5	581 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	GRAMD1C	Q8IYS0	662 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	DCP1B	Q8IZD4	617 aa	Known RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	LRRC52	Q8N7C0	313 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	RDH13	Q8NBN7	331 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	OR10T2	Q8NGX3	314 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	CXorf38	Q8TB03	319 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	C2orf15	Q8WU43	125 aa	Known RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	SPOCK2	Q92563	424 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ELSPBP1	Q96BH3	223 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	PAGE5	Q96GU1	130 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	SHD	Q96IW2	340 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ANKRD36BP1	Q96IX9	119 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ZNF560	Q96MR9	790 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	TMEM209	Q96SK2	561 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	KXD1	Q9BQD3	176 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	GPR88	Q9GZN0	384 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ZCWPW1	Q9H0M4	648 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ZFP14	Q9HCL3	533 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	SLC39A2	Q9NP94	309 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ASAH2	Q9NR71	780 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	AGPAT3	Q9NRZ7	376 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	INTS13	Q9NVM9	706 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	GDAP2	Q9NXN4	497 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	HSPBP1	Q9NZL4	362 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	CGN	Q9P2M7	1197 aa	Known RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	R3HCC1	Q9Y3T6	440 aa	Known RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	YIPF1	Q9Y548	306 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	UBE4B	O95155	1302 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	OBSL1	O75147	1896 aa		7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.45	□□□□□ -1.22
SF3B3-209	ENST00000567635	PTPRD	P23468	1912 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	TICRR	Q7Z2Z1	1910 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	FANCM	Q8IYD8	2048 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	MYOF	Q9NZM1	2061 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	CLIC2	O15247	247 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	ACTN4	O43707	911 aa	Known RBP	7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	KLRC4	O43908	158 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	MOSPD3	O75425	235 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	FGF19	O95750	216 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	MYL1	P05976	194 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	KRT19	P08727	400 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	PFKFB1	P16118	471 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	DEK	P35659	375 aa	Known RBP	7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	CYP2J2	P51589	502 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	PFKP	Q01813	784 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	MYO1E	Q12965	1108 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	PSMD2	Q13200	908 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	SNW1	Q13573	536 aa	Known RBP	7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	BECN1	Q14457	450 aa		7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	SNRNP35	Q16560	246 aa	Known RBP	7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	KNOP1	Q1ED39	458 aa	Known RBP	7.44	□□□□□ -1.22
SF3B3-209	ENST00000567635	FAM78A	Q5JUQ0	283 aa		7.44	□□□□□ -1.22

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