RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 MKNK1Q9BUB5 465 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 MAFFQ9ULX9 164 aa23.26■■□□□ 1.31
NME3-210ENST00000567271 TSC2P49815 1807 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 TRIM49BA6NDI0 452 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 LOC730098B7Z3J9 87 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 PHACTR2O75167 634 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 SEC24AO95486 1093 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 OR4Q2P0C623 313 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 HOXA9P31269 272 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 FKBP3Q00688 224 aaKnown RBP23.25■■□□□ 1.31
NME3-210ENST00000567271 TRPC3Q13507 836 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 LIMS2Q7Z4I7 341 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 TMEM86AQ8N2M4 240 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 TMEM209Q96SK2 561 aa23.25■■□□□ 1.31
NME3-210ENST00000567271 STAU1O95793 577 aaKnown RBP23.24■■□□□ 1.31
NME3-210ENST00000567271 KRT13P13646 458 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 ATICP31939 592 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 SSTR3P32745 418 aaPredicted RBP23.24■■□□□ 1.31
NME3-210ENST00000567271 MYL6P60660 151 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 ADCY1Q08828 1119 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 BIRC3Q13489 604 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 SOWAHAQ2M3V2 549 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 DPH6Q7L8W6 267 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 RPGRIP1Q96KN7 1286 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 ZCWPW1Q9H0M4 648 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 PIDD1Q9HB75 910 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 CYP4F11Q9HBI6 524 aa23.24■■□□□ 1.31
NME3-210ENST00000567271 GOLGA6L22H0YM25 854 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 TNFRSF10AO00220 468 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 PRRG1O14668 218 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 VNN1O95497 513 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 VNN2O95498 520 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 POU2F2P09086 479 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 ZACNQ401N2 412 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 KLHL10Q6JEL2 608 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 SV2AQ7L0J3 742 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 SPATA18Q8TC71 538 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 XYLT2Q9H1B5 865 aa23.23■■□□□ 1.31
NME3-210ENST00000567271 WDR6Q9NNW5 1121 aaKnown RBP23.23■■□□□ 1.31
NME3-210ENST00000567271 GABRDO14764 452 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 SLC16A3O15427 465 aaKnown RBP23.22■■□□□ 1.31
NME3-210ENST00000567271 CCL16O15467 120 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 XYLBO75191 536 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 TRIM49P0CI25 452 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 TRIM49CP0CI26 452 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 EPB41P11171 864 aaKnown RBP23.22■■□□□ 1.31
NME3-210ENST00000567271 NCOA4Q13772 614 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 FOXR2Q6PJQ5 311 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 ADGRF2Q8IZF7 708 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 NELFBQ8WX92 580 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 SYAP1Q96A49 352 aaPredicted RBP23.22■■□□□ 1.31
NME3-210ENST00000567271 PGLYRP2Q96PD5 576 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 NUP62CLQ9H1M0 184 aa23.22■■□□□ 1.31
NME3-210ENST00000567271 C2orf16Q68DN1 1984 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 LHX1P48742 406 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 PPP3CAQ08209 521 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 WDR72Q3MJ13 1102 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 SLC39A12Q504Y0 691 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 TTI2Q6NXR4 508 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 LRRTM3Q86VH5 581 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 OSTM1Q86WC4 334 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 GPT2Q8TD30 523 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 KBTBD7Q8WVZ9 684 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 DUSP9Q99956 384 aaKnown RBP23.21■■□□□ 1.31
NME3-210ENST00000567271 ACBD6Q9BR61 282 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 VRTNQ9H8Y1 702 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 DDX43Q9NXZ2 648 aaKnown RBP23.21■■□□□ 1.31
NME3-210ENST00000567271 NR2E1Q9Y466 385 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 INSL5Q9Y5Q6 135 aa23.21■■□□□ 1.31
NME3-210ENST00000567271 CLUHO75153 1309 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 MTMR11A4FU01 709 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 LRG1P02750 347 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 FAM163BP0C2L3 166 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 GCLMP48507 274 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 MYL7Q01449 175 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 DUSP4Q13115 394 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 GRASPQ7Z6J2 395 aaPredicted RBP23.2■■□□□ 1.3
NME3-210ENST00000567271 ATAD1Q8NBU5 361 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 MMS19Q96T76 1030 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 CRISPLD1Q9H336 500 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 POLIQ9UNA4 740 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 CTNND2Q9UQB3 1225 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 USTQ9Y2C2 406 aa23.2■■□□□ 1.3
NME3-210ENST00000567271 BICDL2A1A5D9 508 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 WARSP23381 471 aaKnown RBP23.19■■□□□ 1.3
NME3-210ENST00000567271 SP100P23497 879 aaPredicted RBP23.19■■□□□ 1.3
NME3-210ENST00000567271 GTF2H1P32780 548 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 TNNC1P63316 161 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 TSPY1Q01534 308 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 SMARCB1Q12824 385 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 PAK1Q13153 545 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 SGSM1Q2NKQ1 1148 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 ZNF699Q32M78 642 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 FILIP1Q7Z7B0 1213 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 DCP1BQ8IZD4 617 aaKnown RBP23.19■■□□□ 1.3
NME3-210ENST00000567271 CEP63Q96MT8 703 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 SLC27A5Q9Y2P5 690 aa23.19■■□□□ 1.3
NME3-210ENST00000567271 C2CD4DB7Z1M9 353 aa23.18■■□□□ 1.3
NME3-210ENST00000567271 TACC1O75410 805 aa23.18■■□□□ 1.3
NME3-210ENST00000567271 ACAT1P24752 427 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms