RNA–Protein interactions for RNA: ENST00000567114.5

RPUSD1-208, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2 BASIC

Gene RPUSD1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-208ENST00000567114 C9orf50Q5SZB4 431 aa27.32■■□□□ 1.96
RPUSD1-208ENST00000567114 WHAMMQ8TF30 809 aa27.32■■□□□ 1.96
RPUSD1-208ENST00000567114 KBTBD7Q8WVZ9 684 aa27.32■■□□□ 1.96
RPUSD1-208ENST00000567114 SNX25Q9H3E2 840 aa27.32■■□□□ 1.96
RPUSD1-208ENST00000567114 DEF6Q9H4E7 631 aa27.32■■□□□ 1.96
RPUSD1-208ENST00000567114 PTPRSQ13332 1948 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 COL4A6Q14031 1691 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 M0QZQ0 153 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 TRAPPC3O43617 180 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 ODC1P11926 461 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 ZNF132P52740 706 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 HTRA4P83105 476 aaPredicted RBP27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 SUSD3Q96L08 255 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 TWNKQ96RR1 684 aa27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 PUF60Q9UHX1 559 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 MRPL42Q9Y6G3 142 aaKnown RBP27.31■■□□□ 1.96
RPUSD1-208ENST00000567114 ARHGAP6O43182 974 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 PDE6CP51160 858 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 MTF1Q14872 753 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 ZNF571Q7Z3V5 609 aaPredicted RBP27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 EPS8L1Q8TE68 723 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 NT5C1AQ9BXI3 368 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 ELOVL4Q9GZR5 314 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 MARCH5Q9NX47 278 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 A8MXQ7 604 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 PDGFRBP09619 1106 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 GNA15P30679 374 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 RAD23BP54727 409 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 RASIP1Q5U651 963 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 NOP9Q86U38 636 aaKnown RBP27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 TMEM173Q86WV6 379 aaPredicted RBP27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 TMEM86AQ8N2M4 240 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 TMEM176AQ96HP8 235 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 RAD9AQ99638 391 aa27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP27.3■■□□□ 1.96
RPUSD1-208ENST00000567114 TLL1O43897 1013 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 FAM163BP0C2L3 166 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 LMO2P25791 158 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 SHHQ15465 462 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 TAF3Q5VWG9 929 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 KCNT2Q6UVM3 1135 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 RAD9BQ6WBX8 426 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 SLC20A1Q8WUM9 679 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 RNPC3Q96LT9 517 aaKnown RBP27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 ADAMTS1Q9UHI8 967 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 STXBP5LQ9Y2K9 1186 aa27.29■■□□□ 1.96
RPUSD1-208ENST00000567114 SSU72P8A0A1W2PR75 194 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 ARHGEF37A1IGU5 675 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 AKR1B10O60218 316 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 WARSP23381 471 aaKnown RBP27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 MAPK8IP2Q13387 824 aaPredicted RBP27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 SMYD5Q6GMV2 418 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 UNC93AQ86WB7 457 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 METTL23Q86XA0 190 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 SLC4A11Q8NBS3 891 aa27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 HEXIM2Q96MH2 286 aaKnown RBP27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 NOCTQ9UK39 431 aaKnown RBP27.28■■□□□ 1.96
RPUSD1-208ENST00000567114 HCRTO43612 131 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 LHX1P48742 406 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 VPS36Q86VN1 386 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 CCDC170Q8IYT3 715 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 FIBCD1Q8N539 461 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 ZNF558Q96NG5 402 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 AGPAT1Q99943 283 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 GPR62Q9BZJ7 368 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 DSEQ9UL01 958 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 NME7Q9Y5B8 376 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 EPN1Q9Y6I3 576 aaPredicted RBP27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 GABRDO14764 452 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 PAEPP09466 180 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 CD19P15391 556 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 LAG3P18627 525 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 ACOT1Q86TX2 421 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 OSTM1Q86WC4 334 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 UBE2OQ9C0C9 1292 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 SEPT11Q9NVA2 429 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 DDX43Q9NXZ2 648 aaKnown RBP27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 PCDHB8Q9UN66 801 aa27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 SF3B1O75533 1304 aaKnown RBP eCLIP27.27■■□□□ 1.96
RPUSD1-208ENST00000567114 ESPNB1AK53 854 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 THAP12O43422 761 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 CYP11A1P05108 521 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 KIF11P52732 1056 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 FAM171A1Q5VUB5 890 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 BCL7CQ8WUZ0 217 aaPredicted RBP27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 ZNF606Q8WXB4 792 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 DDX1Q92499 740 aaKnown RBP27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 SPTLC3Q9NUV7 552 aa27.26■■□□□ 1.95
RPUSD1-208ENST00000567114 H0YGN5 161 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 TNFAIP3P21580 790 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 CYLC1P35663 651 aaPredicted RBP27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 CDR2Q01850 454 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 ASTE1Q2TB18 679 aaPredicted RBP27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 FUT10Q6P4F1 479 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 CEP57Q86XR8 500 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 GLYCTKQ8IVS8 523 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 COLGALT1Q8NBJ5 622 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 IGSF21Q96ID5 467 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 DPEP3Q9H4B8 488 aa27.25■■□□□ 1.95
RPUSD1-208ENST00000567114 NDUFA10O95299 355 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms