RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 COL16A1Q07092 1604 aaPredicted RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 SFI1A8K8P3 1242 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 A8MXQ7 604 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 LZTS3O60299 673 aaPredicted RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 NDUFS2O75306 463 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PLTPP55058 493 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ZNF543Q08ER8 600 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PPIL2Q13356 520 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 KCNB1Q14721 858 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 POLD3Q15054 466 aaPredicted RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 MAN2A1Q16706 1144 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 GSTA3Q16772 222 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PFKFB3Q16875 520 aaPredicted RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 KLHL24Q6TFL4 600 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PHACTR4Q8IZ21 702 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 SHCBP1Q8NEM2 672 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PPP1R36Q96LQ0 422 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 VPS11Q9H270 941 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 TMEM245Q9H330 911 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 TBC1D22BQ9NU19 505 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 APOBEC2Q9Y235 224 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 DCDC2CA8MYV0 355 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 COPEO14579 308 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 GNA15P30679 374 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 COPB1P53618 953 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 HMGCS2P54868 508 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 TMPRSS15P98073 1019 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 TBL3Q12788 808 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 LAMB3Q13751 1172 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 TMEM270Q6UE05 265 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 BHMTQ93088 406 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ATXN7L3BQ96GX2 97 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 TMEM169Q96HH4 297 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 FAM213AQ9BRX8 229 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 C10orf88Q9H8K7 445 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 LATS2Q9NRM7 1088 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 KRT84Q9NSB2 600 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ZSWIM5Q9P217 1185 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 CCDC195A0A1B0GUA6 201 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 H2AFYO75367 372 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 ALDH18A1P54886 795 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 HDAC4P56524 1084 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH13-209ENST00000567109 RASGRP2Q7LDG7 609 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ANKS1AQ92625 1134 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ABTB1Q969K4 478 aaPredicted RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 TTC17Q96AE7 1141 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ATP6V1G3Q96LB4 118 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 GALNT8Q9NY28 637 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 APPL1Q9UKG1 709 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 H0Y626 953 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 MFAP3LO75121 409 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ADD1P35611 737 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 PMS1P54277 932 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 KRT76Q01546 638 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 LRRC41Q15345 812 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 DUOXA2Q1HG44 320 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 GRAMD4Q6IC98 578 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ALKBH2Q6NS38 261 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 SWSAP1Q6NVH7 229 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 FAM161BQ96MY7 647 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 SMAD5Q99717 465 aaKnown RBP6.51□□□□□ -1.37
CDH13-209ENST00000567109 SLC13A1Q9BZW2 595 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 ZNF304Q9HCX3 659 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 PCDHB12Q9Y5F1 795 aa6.51□□□□□ -1.37
CDH13-209ENST00000567109 CCL15-CCL14A0A0B4J2E2 113 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 NBNO60934 754 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 NFICP08651 508 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 SULT1E1P49888 294 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 ROR1Q01973 937 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 TMEM62Q0P6H9 643 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DHX34Q14147 1143 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 CCL15Q16663 113 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 SHROOM1Q2M3G4 852 aaPredicted RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 PAN2Q504Q3 1202 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 TRIM69Q86WT6 500 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 WDR75Q8IWA0 830 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 TTC39CQ8N584 583 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 CERS5Q8N5B7 392 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 SPACA7Q96KW9 195 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 USP28Q96RU2 1077 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DESI2Q9BSY9 194 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DHX35Q9H5Z1 703 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 COPS7BQ9H9Q2 264 aaPredicted RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 THG1LQ9NWX6 298 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.5□□□□□ -1.37
CDH13-209ENST00000567109 TMX2Q9Y320 296 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 A0A1B0GW55 424 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 CCDC85CA6NKD9 419 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 SNTNA6NMZ2 147 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 APOL1O14791 398 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 ACSL3O95573 720 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DUX4L2P0CJ85 424 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DUX4L3P0CJ86 424 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DUX4L4P0CJ87 422 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DUX4L5P0CJ88 424 aa6.5□□□□□ -1.37
CDH13-209ENST00000567109 DUX4L6P0CJ89 424 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms