RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 TRIM49P0CI25 452 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 TRIM49CP0CI26 452 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 NOS2P35228 1153 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 ARPP19P56211 112 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 SNRNP35Q16560 246 aaKnown RBP11.77□□□□□ -0.53
CDH11-212ENST00000566827 CNNM4Q6P4Q7 775 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 RIN2Q8WYP3 895 aaPredicted RBP11.77□□□□□ -0.53
CDH11-212ENST00000566827 TMEM209Q96SK2 561 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 LPIN3Q9BQK8 851 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 HCFC2Q9Y5Z7 792 aa11.77□□□□□ -0.53
CDH11-212ENST00000566827 LAMA1P25391 3075 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 TMEM265A0A087WTH1 108 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 GOLGA6CA6NDK9 693 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 RFPL2O75678 378 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 SLC34A2O95436 690 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 CST3P01034 146 aaPredicted RBP11.76□□□□□ -0.53
CDH11-212ENST00000566827 ITGB3P05106 788 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 GOLGA6DP0CG33 693 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 ZNF445P59923 1031 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 PPP2R3AQ06190 1150 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 PTPN14Q15678 1187 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 ZBTB6Q15916 424 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 KLHL40Q2TBA0 621 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 C1orf127Q8N9H9 656 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 ATL2Q8NHH9 583 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 ZBP1Q9H171 429 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 GOLGA6AQ9NYA3 693 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 ZDBF2Q9HCK1 2354 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 C2orf16Q68DN1 1984 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 TEX28O15482 410 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 AKAP3O75969 853 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 KRT19P08727 400 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 ANKRD40Q6AI12 368 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 SPATA20Q8TB22 786 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 P2RX5Q93086 422 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 SMARCE1Q969G3 411 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 TLE6Q9H808 572 aa11.76□□□□□ -0.53
CDH11-212ENST00000566827 INPPL1O15357 1258 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 EXOC3O60645 756 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 DKK1O94907 266 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 DPCR1Q3MIW9 517 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 KIAA0907Q7Z7F0 614 aaPredicted RBP11.75□□□□□ -0.53
CDH11-212ENST00000566827 TTC9BQ8N6N2 239 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 MRPL43Q8N983 215 aaKnown RBP11.75□□□□□ -0.53
CDH11-212ENST00000566827 PGLYRP2Q96PD5 576 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 CLEC1BQ9P126 229 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 SIX4Q9UIU6 781 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 NRG2O14511 850 aaPredicted RBP11.75□□□□□ -0.53
CDH11-212ENST00000566827 SOAT2O75908 522 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 NR3C1P04150 777 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 IL9P15248 144 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 NR2F2P24468 414 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 POLR2BP30876 1174 aaKnown RBP11.75□□□□□ -0.53
CDH11-212ENST00000566827 SEC13P55735 322 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 PLCB3Q01970 1234 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 KRT17Q04695 432 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 TMEM132DQ14C87 1099 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 RNF135Q8IUD6 432 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 HACE1Q8IYU2 909 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 GPD1LQ8N335 351 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 PI4K2AQ9BTU6 479 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 PLVAPQ9BX97 442 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 LRRC27Q9C0I9 530 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 MUC3BQ9H195 1237 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 RSPH9Q9H1X1 276 aaPredicted RBP11.75□□□□□ -0.53
CDH11-212ENST00000566827 MAGEF1Q9HAY2 307 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 KANSL3Q9P2N6 904 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 NUB1Q9Y5A7 615 aa11.75□□□□□ -0.53
CDH11-212ENST00000566827 NOTCH4Q99466 2003 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 EIF3DO15371 548 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDH11-212ENST00000566827 ZRANB2O95218 330 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDH11-212ENST00000566827 EFEMP2O95967 443 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 RB1P06400 928 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 KCNE1P15382 129 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 ORC1Q13415 861 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 C1orf220Q5T0J3 134 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 KIAA1841Q6NSI8 718 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 TMC5Q6UXY8 1006 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 CLEC17AQ6ZS10 378 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 DDX53Q86TM3 631 aaKnown RBP11.74□□□□□ -0.53
CDH11-212ENST00000566827 LILRB2Q8N423 598 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 RELTQ969Z4 430 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 NSUN3Q9H649 340 aaKnown RBP11.74□□□□□ -0.53
CDH11-212ENST00000566827 CTNND2Q9UQB3 1225 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 FAM170AA1A519 330 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 H0YCG3 227 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 EXTL3O43909 919 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 LONRF1Q17RB8 773 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 ZCWPW2Q504Y3 356 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 INO80DQ53TQ3 878 aaPredicted RBP11.74□□□□□ -0.53
CDH11-212ENST00000566827 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 C9orf57Q5W0N0 161 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 BRSK2Q8IWQ3 736 aa11.74□□□□□ -0.53
CDH11-212ENST00000566827 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDH11-212ENST00000566827 RNF168Q8IYW5 571 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms