RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 DEPDC1BQ8WUY9 529 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 PSMG2Q969U7 264 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 E2F7Q96AV8 911 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 ZSWIM3Q96MP5 696 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 NELL2Q99435 816 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 LRRC3Q9BY71 257 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 SLITRK6Q9H5Y7 841 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 BRD9Q9H8M2 597 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 KBTBD4Q9NVX7 518 aa21.77■■□□□ 1.08
CLN6-207ENST00000566347 NRG2O14511 850 aaPredicted RBP21.76■■□□□ 1.07
CLN6-207ENST00000566347 EXTL3O43909 919 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 GLULP15104 373 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 GJA1P17302 382 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 PSMC3P17980 439 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 PTPRZ1P23471 2315 aaPredicted RBP21.76■■□□□ 1.07
CLN6-207ENST00000566347 GRM2Q14416 872 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 E2F4Q16254 413 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 ZNF852Q6ZMS4 543 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 IQUBQ8NA54 791 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 IRF7Q92985 503 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 BORCS6Q96GS4 357 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 CBWD1Q9BRT8 395 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 FGFBP2Q9BYJ0 223 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 LTB4R2Q9NPC1 389 aa21.76■■□□□ 1.07
CLN6-207ENST00000566347 MRPS17Q9Y2R5 130 aaKnown RBP21.76■■□□□ 1.07
CLN6-207ENST00000566347 A0A1W2PRU2 124 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 FAM170BA6NMN3 283 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 TULP1O00294 542 aaPredicted RBP21.75■■□□□ 1.07
CLN6-207ENST00000566347 NCAM2O15394 837 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 PRPF6O94906 941 aaKnown RBP21.75■■□□□ 1.07
CLN6-207ENST00000566347 VEPH1Q14D04 833 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 WSCD1Q658N2 575 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 DNAJB7Q7Z6W7 309 aaPredicted RBP21.75■■□□□ 1.07
CLN6-207ENST00000566347 TTC9BQ8N6N2 239 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 ZSWIM2Q8NEG5 633 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 TRIM9Q9C026 710 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 SEMA4AQ9H3S1 761 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 TRPV5Q9NQA5 729 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 HEBP1Q9NRV9 189 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 ITGA11Q9UKX5 1188 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 FAM186AA6NE01 2351 aa21.75■■□□□ 1.07
CLN6-207ENST00000566347 LRRN2O75325 713 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 ITGB3P05106 788 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 ZSCAN22P10073 491 aaPredicted RBP21.74■■□□□ 1.07
CLN6-207ENST00000566347 POLR2BP30876 1174 aaKnown RBP21.74■■□□□ 1.07
CLN6-207ENST00000566347 WNT7BP56706 349 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 MGAT5BQ3V5L5 792 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 CNNM4Q6P4Q7 775 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 VITQ6UXI7 678 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 MFSD6LQ8IWD5 586 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 DCP1BQ8IZD4 617 aaKnown RBP21.74■■□□□ 1.07
CLN6-207ENST00000566347 GPD1LQ8N335 351 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 LRRC52Q8N7C0 313 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 C1orf127Q8N9H9 656 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 SPPL2BQ8TCT7 592 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 KCNG4Q8TDN1 519 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 NOC3LQ8WTT2 800 aaKnown RBP21.74■■□□□ 1.07
CLN6-207ENST00000566347 DHX58Q96C10 678 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 SEPT5Q99719 369 aaPredicted RBP21.74■■□□□ 1.07
CLN6-207ENST00000566347 PCIF1Q9H4Z3 704 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 MAGEF1Q9HAY2 307 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 AGAP1Q9UPQ3 857 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 CACNA1IQ9P0X4 2223 aa21.74■■□□□ 1.07
CLN6-207ENST00000566347 COL4A3Q01955 1670 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 CFAP54Q96N23 3096 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 GOLGA8IPA6NC78 632 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 GOLGA8JA6NMD2 632 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 MAN2B1O00754 1011 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 EIF3DO15371 548 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLN6-207ENST00000566347 SOAT2O75908 522 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 GDI1P31150 447 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 VIPR2P41587 438 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 ASIC1P78348 528 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 ARHGAP15Q53QZ3 475 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 FOXD4L5Q5VV16 416 aaPredicted RBP21.73■■□□□ 1.07
CLN6-207ENST00000566347 ATL3Q6DD88 541 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 ZC3H14Q6PJT7 736 aaKnown RBP21.73■■□□□ 1.07
CLN6-207ENST00000566347 SHC4Q6S5L8 630 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 FAM200AQ8TCP9 573 aa21.73■■□□□ 1.07
CLN6-207ENST00000566347 FOXD4L4Q8WXT5 416 aaPredicted RBP21.73■■□□□ 1.07
CLN6-207ENST00000566347 ZNF334Q9HCZ1 680 aaPredicted RBP21.73■■□□□ 1.07
CLN6-207ENST00000566347 MTF2Q9Y483 593 aaPredicted RBP21.73■■□□□ 1.07
CLN6-207ENST00000566347 DMDP11532 3685 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 ZNF263O14978 683 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 HUS1O60921 280 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 F13A1P00488 732 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 TMEM191BP0C7N4 346 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 CD72P21854 359 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 RBP5P82980 135 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 TSPY1Q01534 308 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 GAREM2Q75VX8 874 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 CSGALNACT2Q8N6G5 542 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 CLDN23Q96B33 292 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 ATXN3LQ9H3M9 355 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 PDE11AQ9HCR9 933 aa21.72■■□□□ 1.07
CLN6-207ENST00000566347 SPATA6Q9NWH7 488 aaPredicted RBP21.72■■□□□ 1.07
CLN6-207ENST00000566347 F5P12259 2224 aa21.71■■□□□ 1.07
CLN6-207ENST00000566347 ZNF233A6NK53 670 aa21.71■■□□□ 1.07
CLN6-207ENST00000566347 HEPACAM2A8MVW5 462 aa21.71■■□□□ 1.07
CLN6-207ENST00000566347 SP9P0CG40 484 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms