RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 INTUQ9ULD6 942 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 GPR45Q9Y5Y3 372 aa3.2□□□□□ -1.9
SMG1-212ENST00000566328 POLRMTO00411 1230 aaKnown RBP3.19□□□□□ -1.9
SMG1-212ENST00000566328 TOP3BO95985 862 aaKnown RBP3.19□□□□□ -1.9
SMG1-212ENST00000566328 RHOP08100 348 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 SOX5P35711 763 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 NR4A2P43354 598 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 ALDH9A1P49189 494 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 CDC42EP1Q00587 391 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 CEP78Q5JTW2 689 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 RUSC1-AS1Q66K80 236 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 ZNF66Q6ZN08 573 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 KRT73Q86Y46 540 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 AMOTL1Q8IY63 956 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 DCBLD1Q8N8Z6 715 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 POC1BQ8TC44 478 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 SSH1Q8WYL5 1049 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 DPF2Q92785 391 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 QTRT1Q9BXR0 403 aaKnown RBP3.19□□□□□ -1.9
SMG1-212ENST00000566328 ACTRT3Q9BYD9 372 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 VPS16Q9H269 839 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 CAAP1Q9H8G2 361 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 ARHGEF3Q9NR81 526 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 ZNF580Q9UK33 172 aa3.19□□□□□ -1.9
SMG1-212ENST00000566328 MRPL42Q9Y6G3 142 aaKnown RBP3.19□□□□□ -1.9
SMG1-212ENST00000566328 PRRT4C9JH25 899 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 MYO1FO00160 1098 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 SGTAO43765 313 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 NDUFV1P49821 464 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 RAB39AQ14964 217 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 TRIP6Q15654 476 aaKnown RBP3.18□□□□□ -1.9
SMG1-212ENST00000566328 TBCCQ15814 346 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 ZNF260Q3ZCT1 412 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 SUPT20HL1Q3ZLR7 823 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 AARS2Q5JTZ9 985 aaKnown RBP3.18□□□□□ -1.9
SMG1-212ENST00000566328 ANKRD16Q6P6B7 361 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 SAMD14Q8IZD0 417 aaPredicted RBP3.18□□□□□ -1.9
SMG1-212ENST00000566328 TMIEQ8NEW7 156 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 SCAMP4Q969E2 229 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 HDAC10Q969S8 669 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 AMBRA1Q9C0C7 1298 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 PRSS22Q9GZN4 317 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 VTA1Q9NP79 307 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 MAN1C1Q9NR34 630 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 WWOXQ9NZC7 414 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 WASHC2AQ641Q2 1341 aa3.18□□□□□ -1.9
SMG1-212ENST00000566328 CYP2D7A0A087X1C5 515 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 KCNU1A8MYU2 1149 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 TISP43B9A030 160 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 SMIM22K7EJ46 135 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 QSOX1O00391 747 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 DNAJB5O75953 348 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 CHEK2O96017 543 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 RPLP2P05387 115 aaKnown RBP3.17□□□□□ -1.9
SMG1-212ENST00000566328 SBK3P0C264 359 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 ITGALP20701 1170 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 AGXTP21549 392 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 SLC16A1P53985 500 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 TARDBPQ13148 414 aaKnown RBP eCLIP3.17□□□□□ -1.9
SMG1-212ENST00000566328 GTF2H3Q13889 308 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 CT47A1Q5JQC4 288 aaPredicted RBP3.17□□□□□ -1.9
SMG1-212ENST00000566328 ZNF618Q5T7W0 954 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 PPP4R3AQ6IN85 833 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 SLC2A7Q6PXP3 512 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 GADL1Q6ZQY3 521 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 WDR53Q7Z5U6 358 aaPredicted RBP3.17□□□□□ -1.9
SMG1-212ENST00000566328 PDSS2Q86YH6 399 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 ZDHHC17Q8IUH5 632 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 GALNT16Q8N428 558 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 PRSS3P2Q8NHM4 247 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 IFI44Q8TCB0 444 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 NRG4Q8WWG1 115 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 FAM136AQ96C01 138 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 LRIG1Q96JA1 1093 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 PUS7Q96PZ0 661 aaKnown RBP3.17□□□□□ -1.9
SMG1-212ENST00000566328 NELL2Q99435 816 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 SH2D3AQ9BRG2 576 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 SIK2Q9H0K1 926 aa3.17□□□□□ -1.9
SMG1-212ENST00000566328 ZNF277Q9NRM2 450 aaPredicted RBP3.17□□□□□ -1.9
SMG1-212ENST00000566328 GNL3LQ9NVN8 582 aaKnown RBP3.17□□□□□ -1.9
SMG1-212ENST00000566328 ENPP3O14638 875 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 CD6P30203 668 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 GYS2P54840 703 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 TMPRSS15P98073 1019 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 STAT4Q14765 748 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 RABEP1Q15276 862 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 FLYWCH1Q4VC44 716 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 CATSPERGQ6ZRH7 1159 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 STRA8Q7Z7C7 330 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 MRPL10Q7Z7H8 261 aaKnown RBP3.16□□□□□ -1.9
SMG1-212ENST00000566328 CNGA4Q8IV77 575 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 UBR7Q8N806 425 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 PPM1NQ8N819 430 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 REPS1Q96D71 796 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 SLC2A13Q96QE2 648 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 CNPPD1Q9BV87 410 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 SLKQ9H2G2 1235 aaPredicted RBP3.16□□□□□ -1.9
SMG1-212ENST00000566328 EBF3Q9H4W6 596 aa3.16□□□□□ -1.9
SMG1-212ENST00000566328 BRD9Q9H8M2 597 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms