RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SLC35C1Q96A29 364 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 MED15Q96RN5 788 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 ADAM7Q9H2U9 754 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 TMEM63CQ9P1W3 806 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 TCF20Q9UGU0 1960 aaKnown RBP22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 BDP1A6H8Y1 2624 aa22.61■■□□□ 1.21
SHCBP1-205ENST00000566016 GRXCR2A6NFK2 248 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 MBTPS2O43462 519 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 ATF2P15336 505 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 MXI1P50539 228 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 SGSM1Q2NKQ1 1148 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 UVSSAQ2YD98 709 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 ZNF699Q32M78 642 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 WDR72Q3MJ13 1102 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 TJAP1Q5JTD0 557 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 PTCRAQ6ISU1 281 aaPredicted RBP22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 CYP26C1Q6V0L0 522 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 ADGRF2Q8IZF7 708 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 THEM5Q8N1Q8 247 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 SUSD6Q92537 303 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 RTP3Q9BQQ7 232 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 AFF4Q9UHB7 1163 aaKnown RBP22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 CUL9Q8IWT3 2517 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 GABRDO14764 452 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 ASS1P00966 412 aaKnown RBP22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 CPB1P15086 417 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 PIK3CAP42336 1068 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 LHX1P48742 406 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 KCNQ1P51787 676 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 TNNC1P63316 161 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 GPR17Q13304 367 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 CLUL1Q15846 466 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 CCDC40Q4G0X9 1142 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 DCAF17Q5H9S7 520 aaPredicted RBP22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 LIN9Q5TKA1 542 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 CES5AQ6NT32 575 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 OR10T2Q8NGX3 314 aa22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 SRRTQ9BXP5 876 aaKnown RBP22.6■■□□□ 1.21
SHCBP1-205ENST00000566016 PMM2O15305 246 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 TACC1O75410 805 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 ZMYND10O75800 440 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 HLA-DRAP01903 254 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 POU2F2P09086 479 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 BMP1P13497 986 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 SMARCB1Q12824 385 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 SMAD2Q15796 467 aaKnown RBP22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 ZNF667Q5HYK9 610 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 TCERG1LQ5VWI1 586 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 CCDC149Q6ZUS6 474 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 KBTBD7Q8WVZ9 684 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 ACBD6Q9BR61 282 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 IMPG2Q9BZV3 1241 aa22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 USP15Q9Y4E8 981 aaPredicted RBP22.59■■□□□ 1.21
SHCBP1-205ENST00000566016 SPDYE4A6NLX3 237 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 C8AP07357 584 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 HNRNPA1P09651 372 aaKnown RBP eCLIP22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 SPATA31D3P0C874 917 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 P4HA1P13674 534 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 MYL7Q01449 175 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 SASS6Q6UVJ0 657 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 SPATA31D4Q6ZUB0 917 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 TRIM59Q8IWR1 403 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 TCEAL8Q8IYN2 117 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 TAS1R2Q8TE23 839 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 FAXDC2Q96IV6 333 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 NECTIN4Q96NY8 510 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 ZCWPW1Q9H0M4 648 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 ANO10Q9NW15 660 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 HSFX1Q9UBD0 423 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 COQ4Q9Y3A0 265 aa22.58■■□□□ 1.2
SHCBP1-205ENST00000566016 PTPRDP23468 1912 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 DOCK6Q96HP0 2047 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 CCDC192P0DO97 292 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 WARSP23381 471 aaKnown RBP22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 PCSK1P29120 753 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 ARPP19P56211 112 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 STX1AQ16623 288 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 RARS2Q5T160 578 aaKnown RBP22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 CAVIN1Q6NZI2 390 aaKnown RBP22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 GPR149Q86SP6 731 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 FBXL13Q8NEE6 735 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 MMS19Q96T76 1030 aa22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 DDX43Q9NXZ2 648 aaKnown RBP22.57■■□□□ 1.2
SHCBP1-205ENST00000566016 MTHFRP42898 656 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 TSPY1Q01534 308 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 CBX2Q14781 532 aaPredicted RBP22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 CBWD6Q4V339 395 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 CBWD3Q5JTY5 395 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 CBWD5Q5RIA9 395 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 RNF19BQ6ZMZ0 732 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 C12orf76Q8N812 135 aaPredicted RBP22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 SLC7A14Q8TBB6 771 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 C2orf15Q8WU43 125 aaKnown RBP22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 RIPOR3Q96MK2 946 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 THAP9Q9H5L6 903 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 MMRN2Q9H8L6 949 aa22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 NXF1Q9UBU9 619 aaKnown RBP22.56■■□□□ 1.2
SHCBP1-205ENST00000566016 CCDC195A0A1B0GUA6 201 aa22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 N4BP1O75113 896 aaKnown RBP22.55■■□□□ 1.2
SHCBP1-205ENST00000566016 RFPL2O75678 378 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms