RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 POLGP54098 1239 aaPredicted RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 PRMT2P55345 433 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 GBE1Q04446 702 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 NR5A1Q13285 461 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ERV3-1Q14264 604 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 HABP2Q14520 560 aaPredicted RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 HADHQ16836 314 aaKnown RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 PFKFB4Q16877 469 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 C11orf91Q3C1V1 193 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ANKRD20A4Q4UJ75 823 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ANKRD20A8PQ5CZ79 823 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ANKRD20A2Q5SQ80 823 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ANKRD20A1Q5TYW2 823 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ANKRD20A3Q5VUR7 823 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 WDR73Q6P4I2 378 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 KLHL24Q6TFL4 600 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 IL27RAQ6UWB1 636 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 DENND1CQ8IV53 801 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SCUBE1Q8IWY4 988 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ZZZ3Q8IYH5 903 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 USP38Q8NB14 1042 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 GRK7Q8WTQ7 553 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 TRAPPC12Q8WVT3 735 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 FATE1Q969F0 183 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 NRBF2Q96F24 287 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 XAGE2Q96GT9 111 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SUCLG2Q96I99 432 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 NLRP4Q96MN2 994 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 EYA3Q99504 573 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CRACR2AQ9BSW2 395 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 OR10A4Q9H209 315 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ABCG8Q9H221 673 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 ZNF395Q9H8N7 513 aaPredicted RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 PLA2G2EQ9NZK7 142 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 HSPBP1Q9NZL4 362 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 EMC3Q9P0I2 261 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 HMG20BQ9P0W2 317 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 SPATA7Q9P0W8 599 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 DKK3Q9UBP4 350 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 FETUBQ9UGM5 382 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 COQ6Q9Y2Z9 468 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 CAB39Q9Y376 341 aaPredicted RBP3.28□□□□□ -1.88
CHD9-216ENST00000565803 PCDHA11Q9Y5I1 949 aa3.28□□□□□ -1.88
CHD9-216ENST00000565803 A0A1W2PRV1 198 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 CAPN8A6NHC0 703 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 FAM227AF5H4B4 570 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 NOP56O00567 594 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 SOX1O00570 391 aaPredicted RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 APOL1O14791 398 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 SGSM2O43147 1006 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 SLC25A17O43808 307 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 KDM1AO60341 852 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 PEX11AO75192 247 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 BBOX1O75936 387 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 APBB3O95704 486 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 HNRNPA1P09651 372 aaKnown RBP eCLIP3.27□□□□□ -1.89
CHD9-216ENST00000565803 ZNF3P17036 446 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 SMPD1P17405 629 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 TFE3P19532 575 aaPredicted RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 CD9P21926 228 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 GRIA2P42262 883 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 AFMP43652 599 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 MAN2A2P49641 1150 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 NT5C2P49902 561 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 VCPP55072 806 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 RAC1P63000 192 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 CD83Q01151 205 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 DDR1Q08345 913 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 DCTN2Q13561 401 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 NCAPHQ15003 741 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 CTXN3Q4LDR2 81 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 CAVIN4Q5BKX8 364 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 SULT6B1Q6IMI4 303 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 LILRA6Q6PI73 481 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 FAM160B2Q86V87 743 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 PALM2Q8IXS6 379 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 CMTR2Q8IYT2 770 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 TMEM145Q8NBT3 493 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 DNAJB8Q8NHS0 232 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 URGCPQ8TCY9 931 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 DDI1Q8WTU0 396 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 FAM216AQ8WUB2 273 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 LRTOMTQ8WZ04 291 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 TMEM169Q96HH4 297 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 UQCC2Q9BRT2 126 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 CARD6Q9BX69 1037 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 PUS3Q9BZE2 481 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 JMJD4Q9H9V9 463 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 ZFYVE28Q9HCC9 887 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 DMRT3Q9NQL9 472 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 ANO10Q9NW15 660 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 MARK1Q9P0L2 795 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 H2AFY2Q9P0M6 372 aaPredicted RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 FNDC3AQ9Y2H6 1198 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 NOC2LQ9Y3T9 749 aaKnown RBP3.27□□□□□ -1.89
CHD9-216ENST00000565803 PLXNA3P51805 1871 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 GOLGA6L7A0A1B0GV03 622 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 hCG_1809904A0A1W2PP81 198 aa3.27□□□□□ -1.89
CHD9-216ENST00000565803 A0A1W2PPE2 198 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms