RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 WNK4Q96J92 1243 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 TMEM79Q9BSE2 394 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 TASP1Q9H6P5 420 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SH3BP4Q9P0V3 963 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 GRIN2AQ12879 1464 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 VWA5AO00534 786 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 S100A1P23297 94 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 FDFT1P37268 417 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 CDC42EP1Q00587 391 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 LRRC41Q15345 812 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 HAVCR1Q96D42 359 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 ATP6V1HQ9UI12 483 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 MYRFQ9Y2G1 1151 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 LEMD3Q9Y2U8 911 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 NEU2Q9Y3R4 380 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 FHOD1Q9Y613 1164 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ANKRD12Q6UB98 2062 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SSU72P8A0A1W2PR75 194 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 NUDT2P50583 147 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 PEX3P56589 373 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 DSTYKQ6XUX3 929 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SULF1Q8IWU6 871 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SCUBE1Q8IWY4 988 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 CMTR1Q8N1G2 835 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 BHMT2Q9H2M3 363 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 RXFP1Q9HBX9 757 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ABCC10Q5T3U5 1492 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 C1orf232A0A0U1RR37 186 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 RAD51BO15315 384 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 KCNB1Q14721 858 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SNX17Q15036 470 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ZNF568Q3ZCX4 644 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 B3GNT6Q6ZMB0 384 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 BTN2A1Q7KYR7 527 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 HEATR4Q86WZ0 1026 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ZCCHC7Q8N3Z6 543 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 COMMD8Q9NX08 183 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 CCNL1Q9UK58 526 aaPredicted RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 RAD54BQ9Y620 910 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 TCOF1Q13428 1488 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 YEATS2Q9ULM3 1422 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 FASP25445 335 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 PSMD4P55036 377 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 LRRC14Q15048 493 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SF3B3Q15393 1217 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 LRRC6Q86X45 466 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 DHX35Q9H5Z1 703 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 S100A6P06703 90 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 MYL12AP19105 171 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 SCTRP47872 440 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 GTF2H3Q13889 308 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ZNF677Q86XU0 584 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ATPAF2Q8N5M1 289 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 RBM46Q8TBY0 533 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 STARD8Q92502 1023 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ANKRD7Q92527 254 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ERP44Q9BS26 406 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 TSEN34Q9BSV6 310 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 GOLPH3Q9H4A6 298 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 CCDC59Q9P031 241 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 XPO7Q9UIA9 1087 aaKnown RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 CCDC182A6NF36 153 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 FAM220BPB1ANY3 271 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 PIK3CDO00329 1044 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 BMP10O95393 424 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 ZNF23P17027 643 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 HOXC9P31274 260 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 COASYQ13057 564 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 CENPLQ8N0S6 344 aaPredicted RBP5.3□□□□□ -1.56
SMG1-211ENST00000565324 C1orf54Q8WWF1 131 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 RAD54LQ92698 747 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 MNTQ99583 582 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 TRIM39Q9HCM9 518 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 PRKAG2Q9UGJ0 569 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 MAP3K19Q56UN5 1328 aa5.3□□□□□ -1.56
SMG1-211ENST00000565324 TTC26A0AVF1 554 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 ESYT3A0FGR9 886 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 EIF4E1BA6NMX2 242 aaKnown RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 SOAT2O75908 522 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 FAM200BP0CF97 657 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 YWHABP31946 246 aaKnown RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 STAT3P40763 770 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 PHKA1P46020 1223 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 RAB2AP61019 212 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 ITGB3BPQ13352 177 aaPredicted RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 USP10Q14694 798 aaKnown RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 ERO1BQ86YB8 467 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 PPIL6Q8IXY8 311 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 SRPK1Q96SB4 655 aaKnown RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 ANTXR1Q9H6X2 564 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 VTI1BQ9UEU0 232 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 SH3GLB1Q9Y371 365 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 CDC42BPBQ9Y5S2 1711 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 ATP12AP54707 1039 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 CYP51A1Q16850 503 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 BNC2Q6ZN30 1099 aaPredicted RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 DGCR14Q96DF8 476 aaKnown RBP5.29□□□□□ -1.56
SMG1-211ENST00000565324 SLITRK2Q9H156 845 aa5.29□□□□□ -1.56
SMG1-211ENST00000565324 LATS2Q9NRM7 1088 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms