RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.81■□□□□ 0.92
CLN6-205ENST00000564846 SNX9Q9Y5X1 595 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 ALG6Q9Y672 507 aa20.81■□□□□ 0.92
CLN6-205ENST00000564846 CENPFP49454 3210 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 KCNK3O14649 394 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 PPEF2O14830 753 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 MMP8P22894 467 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 RAB27AP51159 221 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 DNA2P51530 1060 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 MRPL10Q7Z7H8 261 aaKnown RBP20.8■□□□□ 0.92
CLN6-205ENST00000564846 SH3TC2Q8TF17 1288 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 C11orf70Q9BRQ4 267 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 SELENOOQ9BVL4 669 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 ELOVL4Q9GZR5 314 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 CHORDC1Q9UHD1 332 aaPredicted RBP20.8■□□□□ 0.92
CLN6-205ENST00000564846 SSTR3P32745 418 aaPredicted RBP20.8■□□□□ 0.92
CLN6-205ENST00000564846 NDST1P52848 882 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 PTP4A2Q12974 167 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 ZNF618Q5T7W0 954 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 TWNKQ96RR1 684 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 MRPL47Q9HD33 250 aaKnown RBP20.8■□□□□ 0.92
CLN6-205ENST00000564846 SLC38A7Q9NVC3 462 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 HMGXB4Q9UGU5 601 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 GIT1Q9Y2X7 761 aa20.8■□□□□ 0.92
CLN6-205ENST00000564846 MIF4GDA9UHW6 222 aaKnown RBP20.79■□□□□ 0.92
CLN6-205ENST00000564846 ARVCFO00192 962 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 PTGESO14684 152 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 ZNF623O75123 536 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 CALB1P05937 261 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 VDRP11473 427 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 MESDQ14696 234 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 MMS22LQ6ZRQ5 1243 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 PPP1R10Q96QC0 940 aaKnown RBP20.79■□□□□ 0.92
CLN6-205ENST00000564846 NT5C1AQ9BXI3 368 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 TRPV6Q9H1D0 765 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 RNF19AQ9NV58 838 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 GDAP2Q9NXN4 497 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 SCINQ9Y6U3 715 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 HTTP42858 3142 aa20.79■□□□□ 0.92
CLN6-205ENST00000564846 PDCD11Q14690 1871 aaKnown RBP20.78■□□□□ 0.92
CLN6-205ENST00000564846 CKBP12277 381 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 LRPAP1P30533 357 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 TAF6P49848 677 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 SOX4Q06945 474 aaPredicted RBP20.78■□□□□ 0.92
CLN6-205ENST00000564846 DSC3Q14574 896 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 PTPROQ16827 1216 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 NOA1Q8NC60 698 aaKnown RBP20.78■□□□□ 0.92
CLN6-205ENST00000564846 C1orf131Q8NDD1 294 aaKnown RBP20.78■□□□□ 0.92
CLN6-205ENST00000564846 SPATA4Q8NEY3 305 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 PTPN22Q9Y2R2 807 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 TRIP11Q15643 1979 aa20.78■□□□□ 0.92
CLN6-205ENST00000564846 KPNA7A9QM74 516 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 DNM1LO00429 736 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 SKIP12755 728 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 CNGA2Q16280 664 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 SV2CQ496J9 727 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 PLEKHA7Q6IQ23 1121 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 UNC93AQ86WB7 457 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 WDTC1Q8N5D0 677 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 MS4A14Q96JA4 679 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 HEXIM2Q96MH2 286 aaKnown RBP20.77■□□□□ 0.92
CLN6-205ENST00000564846 ZFP42Q96MM3 310 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 OSBPL7Q9BZF2 842 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 UNC93B1Q9H1C4 597 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 PARVAQ9NVD7 372 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 ANAPC7Q9UJX3 599 aa20.77■□□□□ 0.92
CLN6-205ENST00000564846 A0A0U1RQF3 1178 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 DDX3YO15523 660 aaKnown RBP20.77■□□□□ 0.91
CLN6-205ENST00000564846 COMTP21964 271 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 MLH1P40692 756 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 MAMLD1Q13495 774 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 STILQ15468 1287 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 SGO2Q562F6 1265 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 DENND1BQ6P3S1 775 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 UBL4BQ8N7F7 174 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 ACTRT1Q8TDG2 376 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 WNT8AQ9H1J5 351 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.77■□□□□ 0.91
CLN6-205ENST00000564846 FRMPD3Q5JV73 1810 aa20.77■□□□□ 0.91
CLN6-205ENST00000564846 TMEM110-MUSTN1A8MSY1 372 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 ORC1Q13415 861 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 SOWAHAQ2M3V2 549 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 C2CD6Q53TS8 623 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 ERICH1Q86X53 443 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 GSTCDQ8NEC7 633 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 PGBD4Q96DM1 585 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 MRPL45Q9BRJ2 306 aaKnown RBP20.76■□□□□ 0.91
CLN6-205ENST00000564846 CARD9Q9H257 536 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 UBN1Q9NPG3 1134 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 PAK6Q9NQU5 681 aaPredicted RBP20.76■□□□□ 0.91
CLN6-205ENST00000564846 STRIP2Q9ULQ0 834 aa20.76■□□□□ 0.91
CLN6-205ENST00000564846 MEIS3P2A8K0S8 358 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 MYO1FO00160 1098 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 O00370 1275 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 MGEA5O60502 916 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 THP07101 528 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 SLC1A1P43005 524 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 MMGT1Q8N4V1 131 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 MSANTD4Q8NCY6 345 aa20.75■□□□□ 0.91
CLN6-205ENST00000564846 GAD1Q99259 594 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms