RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 USP28Q96RU2 1077 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 FAM126AQ9BYI3 521 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 DNAJC25Q9H1X3 360 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 PANK4Q9NVE7 773 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 MTF2Q9Y483 593 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-204ENST00000564664 SOBPA7XYQ1 873 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 CHADO15335 359 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 EXTL3O43909 919 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 GCNT3O95395 438 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 IDEP14735 1019 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 GDI1P31150 447 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 FOXK2Q01167 660 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 VEPH1Q14D04 833 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 STK38Q15208 465 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 TEAD2Q15562 447 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 ARHGAP15Q53QZ3 475 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 FAM173BQ6P4H8 233 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 VITQ6UXI7 678 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 TMC8Q8IU68 726 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 MAML2Q8IZL2 1156 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 PYM1Q9BRP8 204 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 TNMDQ9H2S6 317 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 CRISPLD1Q9H336 500 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 SLITRK6Q9H5Y7 841 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 HEBP1Q9NRV9 189 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 SLC27A5Q9Y2P5 690 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 PCDHGA2Q9Y5H1 932 aa13.15□□□□□ -0.3
GTF3C1-204ENST00000564664 EP300Q09472 2414 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 HEPACAM2A8MVW5 462 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 TISP43B9A030 160 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 SPTLC2O15270 562 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 CD72P21854 359 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 CDC25CP30307 473 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 VIPR2P41587 438 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 KCNA1Q09470 495 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 FCHO2Q0JRZ9 810 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 FZD5Q13467 585 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 PPP2R5DQ14738 602 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 SURF1Q15526 300 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 NFE2Q16621 373 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 SLC39A12Q504Y0 691 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 CNNM4Q6P4Q7 775 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 BRSK2Q8IWQ3 736 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 TMEM86AQ8N2M4 240 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 TMEM130Q8N3G9 435 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 LRRC52Q8N7C0 313 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 IQUBQ8NA54 791 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 OR10T2Q8NGX3 314 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 FAM3CQ92520 227 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 SNX21Q969T3 373 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 PANK2Q9BZ23 570 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 ATXN3LQ9H3M9 355 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 C8orf33Q9H7E9 229 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 KIAA1586Q9HCI6 787 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 VPS13AQ96RL7 3174 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 GVINP1Q7Z2Y8 2422 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 DMDP11532 3685 aa13.14□□□□□ -0.31
GTF3C1-204ENST00000564664 MIA3Q5JRA6 1907 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 DPYSL4O14531 572 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 HUS1O60921 280 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 LRRN2O75325 713 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 YEATS4O95619 227 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 HAPLN1P10915 354 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TARSP26639 723 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 NRLP54845 237 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 SNRPFP62306 86 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 RBP5P82980 135 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 PLCB2Q00722 1185 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TSPY1Q01534 308 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 GRM2Q14416 872 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TAF12Q16514 161 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 MGAT5BQ3V5L5 792 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 WSCD1Q658N2 575 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 GAREM2Q75VX8 874 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ARID3BQ8IVW6 561 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 EFCAB13Q8IY85 973 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ZNF687Q8N1G0 1237 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 FAM200AQ8TCP9 573 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 CSGALNACT1Q8TDX6 532 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ATRIPQ8WXE1 791 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 NELL1Q92832 810 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TMEM209Q96SK2 561 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ACBD6Q9BR61 282 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 TASP1Q9H6P5 420 aa13.13□□□□□ -0.31
GTF3C1-204ENST00000564664 ZSCAN32Q9NX65 697 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms