RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 SPATA31C2B4DYI2 1134 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 B4GALT5O43286 388 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 PGK2P07205 417 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 CD48P09326 243 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 FOXN2P32314 431 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 GBP1P32455 592 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 PTP4A2Q12974 167 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 TAF5Q15542 800 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 ZNF568Q3ZCX4 644 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 CCDC63Q8NA47 563 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 TRPM4Q8TD43 1214 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 GRK7Q8WTQ7 553 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 TMEM174Q8WUU8 243 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 NLRP4Q96MN2 994 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 SENP7Q9BQF6 1050 aa14.26□□□□□ -0.13
CLK3-215ENST00000564353 STMN4Q9H169 189 aaPredicted RBP14.26□□□□□ -0.13
CLK3-215ENST00000564353 ALG13Q9NP73 1137 aaKnown RBP14.26□□□□□ -0.13
CLK3-215ENST00000564353 CNTNAP2Q9UHC6 1331 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 SRRM3A6NNA2 597 aaPredicted RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 ASAP2O43150 1006 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 KRT15P19012 456 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 UBA1P22314 1058 aaKnown RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 RDXP35241 583 aaKnown RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 SLC1A1P43005 524 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 GDF10P55107 478 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 ELF3P78545 371 aaPredicted RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 GHRHRQ02643 423 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 PKN2Q16513 984 aaKnown RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 WDR78Q5VTH9 848 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 DNAJC24Q6P3W2 148 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 ENOSF1Q7L5Y1 443 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 RNF149Q8NC42 400 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 PCYT2Q99447 389 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 AVENQ9NQS1 362 aaPredicted RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 CISHQ9NSE2 258 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 A0A0B4J269 797 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 A0A1W2PPM1 405 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 STXBP2Q15833 593 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 RAB6CQ53S08 254 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 DALRD3Q5D0E6 543 aaKnown RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 TNFAIP8L3Q5GJ75 292 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 CGB2Q6NT52 195 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 SERPINB12Q96P63 405 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 SLITRK1Q96PX8 696 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 IMPG2Q9BZV3 1241 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 RAB6CQ9H0N0 254 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 KDM4CQ9H3R0 1056 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 ECT2Q9H8V3 914 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 C17orf75Q9HAS0 396 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 MRPL47Q9HD33 250 aaKnown RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 GGA2Q9UJY4 613 aa14.25□□□□□ -0.13
CLK3-215ENST00000564353 USP15Q9Y4E8 981 aaPredicted RBP14.25□□□□□ -0.13
CLK3-215ENST00000564353 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 BPIFB4P59827 614 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 IGBP1P78318 339 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 CCNG2Q16589 344 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 ARMC9Q7Z3E5 817 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 RHPN2Q8IUC4 686 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 FITM2Q8N6M3 262 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 CCDC89Q8N998 374 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 JOSD2Q8TAC2 188 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 RNF19AQ9NV58 838 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 PARVAQ9NVD7 372 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 AGTPBP1Q9UPW5 1226 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 LIASO43766 372 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 KLRC2P26717 231 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 TCF7P36402 384 aaPredicted RBP14.24□□□□□ -0.13
CLK3-215ENST00000564353 TGFB2P61812 414 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 MGAT5Q09328 741 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 PLEKHA7Q6IQ23 1121 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 WDTC1Q8N5D0 677 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 C3orf20Q8ND61 904 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 CGRRF1Q99675 332 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 LBHD1Q9BQE6 289 aaPredicted RBP14.24□□□□□ -0.13
CLK3-215ENST00000564353 NKIRAS1Q9NYS0 192 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 GGA3Q9NZ52 723 aa14.24□□□□□ -0.13
CLK3-215ENST00000564353 MYBL1P10243 752 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 SSTR1P30872 391 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 RFC1P35251 1148 aaPredicted RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 WDR4P57081 412 aaKnown RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 PDIA2Q13087 525 aaKnown RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 WDR72Q3MJ13 1102 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 ACCSLQ4AC99 568 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 ANKRD22Q5VYY1 191 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 DENND1BQ6P3S1 775 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 CCDC33Q8N5R6 958 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 PPP1R13LQ8WUF5 828 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 COPS5Q92905 334 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 ROPN1BQ9BZX4 212 aaPredicted RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 NSRP1Q9H0G5 558 aaKnown RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 DHX33Q9H6R0 707 aaKnown RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 ROPN1Q9HAT0 212 aaPredicted RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 MAP3K20Q9NYL2 800 aaKnown RBP14.23□□□□□ -0.13
CLK3-215ENST00000564353 INO80B-WBP1J3KQ70 363 aa14.23□□□□□ -0.13
CLK3-215ENST00000564353 IGF2BP3O00425 579 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLK3-215ENST00000564353 ZC3H11AO75152 810 aaKnown RBP eCLIP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms