RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CCDC169A6NNP5 214 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 K7ENM7 598 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 BIN1O00499 593 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ABLIM1O14639 778 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ENC1O14682 589 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 B4GALT5O43286 388 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 GREM1O60565 184 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 TSPAN1O60635 241 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SMC2O95347 1197 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ECEL1O95672 775 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 TIMP1P01033 207 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 PIGRP01833 764 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 CXCL10P02778 98 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 PRKCBP05771 671 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 MASP1P48740 699 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 GYS2P54840 703 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 CCL23P55773 120 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 GTF2BQ00403 316 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 CDC42EP1Q00587 391 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 MORC3Q14149 939 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 TFDP1Q14186 410 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 POU4F3Q15319 338 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 FAM187BQ17R55 369 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 BMT2Q1RMZ1 405 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SKOR2Q2VWA4 1001 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ZC2HC1CQ53FD0 456 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 COBLL1Q53SF7 1204 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 TSHZ1Q6ZSZ6 1077 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF720Q7Z2F6 126 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 HAUS6Q7Z4H7 955 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SRGAP1Q7Z6B7 1085 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 RELL1Q8IUW5 271 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ZBTB8OSQ8IWT0 167 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 FAM178BQ8IXR5 827 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SMYD4Q8IYR2 804 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 AGGF1Q8N302 714 aaeCLIP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 LILRB2Q8N423 598 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SCFD1Q8WVM8 642 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 HNRNPLLQ8WVV9 542 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 LINC01599Q8WXQ3 324 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 CCDC34Q96HJ3 373 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 RHOVQ96L33 236 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 C8orf48Q96LL4 319 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 FUCA2Q9BTY2 467 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 GCOM2Q9BZD3 368 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 C2orf40Q9H1Z8 148 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SLC39A2Q9NP94 309 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 HOOK1Q9UJC3 728 aaKnown RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ZMYND8Q9ULU4 1186 aaPredicted RBP5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 GINS2Q9Y248 185 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 SQORQ9Y6N5 450 aa5.69□□□□□ -1.5
HERPUD1-207ENST00000563781 ALPK3Q96L96 1907 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 MYH9P35579 1960 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 TISP43B9A030 160 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 INO80B-WBP1J3KQ70 363 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 M0QZ92 97 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ACKR2O00590 384 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 EIF3DO15371 548 aaKnown RBP eCLIP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 TGFB1I1O43294 461 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 MGEA5O60502 916 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 FBXO24O75426 580 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 PRPF6O94906 941 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 GCNT3O95395 438 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 PROCP04070 461 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 CTSBP07858 339 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 RAG1P15918 1043 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 SYN1P17600 705 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ARF4P18085 180 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 NME2P22392 152 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 HOXA11P31270 313 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 CD52P31358 61 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 EFNA5P52803 228 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 EPHB4P54760 987 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 TBX4P57082 545 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ALCAMQ13740 583 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 MAPK6Q16659 721 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ZCWPW2Q504Y3 356 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 EXOSC6Q5RKV6 272 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 UBXN11Q5T124 520 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 L1TD1Q5T7N2 865 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF658Q5TYW1 1059 aaPredicted RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 EEF1DP3Q658K8 133 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ISM2Q6H9L7 571 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 MFSD5Q6N075 450 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 SLC39A4Q6P5W5 647 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 Q6ZS46 218 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 CATSPER4Q7RTX7 472 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ADSSL1Q8N142 457 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 SYNPOQ8N3V7 929 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 GUF1Q8N442 669 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 TRIML1Q8N9V2 468 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 DBF4BQ8NFT6 615 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 ZNF507Q8TCN5 953 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 STK35Q8TDR2 534 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 SCLT1Q96NL6 688 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 SPOCK3Q9BQ16 436 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 CORO1BQ9BR76 489 aa5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 TARS2Q9BW92 718 aaKnown RBP5.68□□□□□ -1.5
HERPUD1-207ENST00000563781 SSBP4Q9BWG4 385 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms