RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 NFICP08651 508 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 ZSCAN20P17040 1043 aaPredicted RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 FGFR4P22455 802 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 GTF2F1P35269 517 aaKnown RBP eCLIP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 PNPLA4P41247 253 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 NAP1L1P55209 391 aaKnown RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 MYL6P60660 151 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 RBP5P82980 135 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 TWF2Q6IBS0 349 aaKnown RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 FAM228AQ86W67 206 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 TMEM192Q8IY95 271 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 RPUSD2Q8IZ73 545 aaKnown RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 LRRC52Q8N7C0 313 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 TMEM40Q8WWA1 233 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 RFFLQ8WZ73 363 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 KAT5Q92993 513 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 ISCUQ9H1K1 167 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 PDCL3Q9H2J4 239 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 CYP3A43Q9HB55 503 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 STARD7Q9NQZ5 370 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 DNAAF2Q9NVR5 837 aaKnown RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 DPP3Q9NY33 737 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 NOCTQ9UK39 431 aaKnown RBP10.36□□□□□ -0.75
UBFD1-202ENST00000563366 NUB1Q9Y5A7 615 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 PCDHB4Q9Y5E5 795 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 PTCH2Q9Y6C5 1203 aa10.36□□□□□ -0.75
UBFD1-202ENST00000563366 NCANO14594 1321 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 A0A1W2PQ45 241 aaPredicted RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 A0A1W2PQY0 241 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 DNM1LO00429 736 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 TLR3O15455 904 aaKnown RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 RECQL4O94761 1208 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 SLU7O95391 586 aaKnown RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 SGPL1O95470 568 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 CST3P01034 146 aaPredicted RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 MYBL1P10243 752 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 CYP3A5P20815 502 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 ACO1P21399 889 aaKnown RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 GNA15P30679 374 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 THPOP40225 353 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 TNNC1P63316 161 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 MGAT3Q09327 533 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 FOXC1Q12948 553 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 PAK2Q13177 524 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 FAM26DQ5JW98 314 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 TMEM270Q6UE05 265 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 NOP9Q86U38 636 aaKnown RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 SLC47A2Q86VL8 602 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 RBBP8NLQ8NC74 664 aaPredicted RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 MNS1Q8NEH6 495 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 CAGE1Q8TC20 777 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF560Q96MR9 790 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 IRX2Q9BZI1 471 aaPredicted RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 XYLT2Q9H1B5 865 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 UBN1Q9NPG3 1134 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 SLC38A7Q9NVC3 462 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 SNTG2Q9NY99 539 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 ZMIZ1Q9ULJ6 1067 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 NOC2LQ9Y3T9 749 aaKnown RBP10.35□□□□□ -0.75
UBFD1-202ENST00000563366 CEP83Q9Y592 693 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 PCDHGC5Q9Y5F6 944 aa10.35□□□□□ -0.75
UBFD1-202ENST00000563366 A0A0U1RQJ8 604 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 MED7O43513 233 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 LSM8O95777 96 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 PAEPP09466 180 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 CTSHP09668 335 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 KCNE1P15382 129 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 PRLRP16471 622 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 TCP1P17987 556 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 POLR2BP30876 1174 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 ASPAP45381 313 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 GALCP54803 685 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 HADHBP55084 474 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 GPC5P78333 572 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 WHAMMP3Q1A5X7 153 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 WDR72Q3MJ13 1102 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 XKR4Q5GH76 650 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 FBXO47Q5MNV8 452 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 UBXN11Q5T124 520 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 PAPD7Q5XG87 772 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 SPOPLQ6IQ16 392 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 ALKAL1Q6UXT8 129 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 CCDC116Q8IYX3 515 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 UBR7Q8N806 425 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 CEP112Q8N8E3 955 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 SLC43A3Q8NBI5 491 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 STK32AQ8WU08 396 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 PPP1R13LQ8WUF5 828 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 SLC20A1Q8WUM9 679 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 ATRIPQ8WXE1 791 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 HPDLQ96IR7 371 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 VCPIP1Q96JH7 1222 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 RPGRIP1Q96KN7 1286 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 EIF2AQ9BY44 585 aaKnown RBP10.34□□□□□ -0.75
UBFD1-202ENST00000563366 BCO2Q9BYV7 579 aa10.34□□□□□ -0.75
UBFD1-202ENST00000563366 ZNF518BQ9C0D4 1074 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms