RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 TPD52L1Q16890 204 aaPredicted RBP10.51□□□□□ -0.73
CLK3-208ENST00000562626 ZNF699Q32M78 642 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 WDR72Q3MJ13 1102 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 TCP11X2Q5H9J9 407 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 KIAA1841Q6NSI8 718 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 DPY19L2P1Q6NXN4 242 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 LLGL2Q6P1M3 1020 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 SPATA31D4Q6ZUB0 917 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 LRRTM3Q86VH5 581 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 PALB2Q86YC2 1186 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 KAT5Q92993 513 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 CRISPLD1Q9H336 500 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 TLE6Q9H808 572 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 VRTNQ9H8Y1 702 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 MRPL17Q9NRX2 175 aaKnown RBP10.51□□□□□ -0.73
CLK3-208ENST00000562626 TMLHEQ9NVH6 421 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 HMGXB4Q9UGU5 601 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.51□□□□□ -0.73
CLK3-208ENST00000562626 CDY1Q9Y6F8 540 aa10.51□□□□□ -0.73
CLK3-208ENST00000562626 CARNS1A5YM72 827 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 TNFRSF10AO00220 468 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 GABRDO14764 452 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 TRAPPC3O43617 180 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 ATP2C2O75185 946 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 OAZ2O95190 189 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 GNA14O95837 355 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 AFPP02771 609 aaKnown RBP10.5□□□□□ -0.73
CLK3-208ENST00000562626 PNPLA4P41247 253 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 MTIF2P46199 727 aaKnown RBP10.5□□□□□ -0.73
CLK3-208ENST00000562626 CLCN4P51793 760 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 ROR1Q01973 937 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 KCNMA1Q12791 1236 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 LRMPQ12912 555 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 ORC1Q13415 861 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 MAN2A1Q16706 1144 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 CTC1Q2NKJ3 1217 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 OVOS1Q6IE37 1185 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 LILRA6Q6PI73 481 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 ARHGEF19Q8IW93 802 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 ADGRF2Q8IZF7 708 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 TTC9BQ8N6N2 239 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 FBXL13Q8NEE6 735 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 TWNKQ96RR1 684 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 PKMYT1Q99640 499 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 TUBGCP2Q9BSJ2 902 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 CRACR2AQ9BSW2 395 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 DPEP3Q9H4B8 488 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 RAB20Q9NX57 234 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 CLEC1BQ9P126 229 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 FNIP2Q9P278 1114 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 BARX2Q9UMQ3 279 aaPredicted RBP10.5□□□□□ -0.73
CLK3-208ENST00000562626 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
CLK3-208ENST00000562626 HCFC2Q9Y5Z7 792 aa10.5□□□□□ -0.73
CLK3-208ENST00000562626 NUP210Q8TEM1 1887 aaPredicted RBP10.5□□□□□ -0.73
CLK3-208ENST00000562626 KIF26AQ9ULI4 1882 aaPredicted RBP10.5□□□□□ -0.73
CLK3-208ENST00000562626 CACNA1AO00555 2505 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 XIRP2A4UGR9 3374 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 PMM2O15305 246 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 TGM5O43548 720 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 SEC24AO95486 1093 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 FGFR1OPO95684 399 aaKnown RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 CALCAP01258 141 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 WEE2P0C1S8 567 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 PRKCSHP14314 528 aaPredicted RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 SLC9A1P19634 815 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 EEF1GP26641 437 aaKnown RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 ATICP31939 592 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 NDUFV1P49821 464 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 KLK7P49862 253 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 COPB1P53618 953 aaKnown RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 ARPP19P56211 112 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 ZNF445P59923 1031 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 PSMC1P62191 440 aaKnown RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 YWHAHQ04917 246 aaPredicted RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 MYO1EQ12965 1108 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 ADAM15Q13444 863 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 SGSM1Q2NKQ1 1148 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 CTXN3Q4LDR2 81 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 VWA3BQ502W6 1294 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 ZNF667Q5HYK9 610 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 PDE12Q6L8Q7 609 aaKnown RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 ZNF280DQ6N043 979 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 GJB7Q6PEY0 223 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 GAS2L3Q86XJ1 694 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 TOP6BLQ8N6T0 577 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 UBR7Q8N806 425 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 C12orf76Q8N812 135 aaPredicted RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 MAFAQ8NHW3 353 aaPredicted RBP10.49□□□□□ -0.73
CLK3-208ENST00000562626 WHAMMQ8TF30 809 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 BCO2Q9BYV7 579 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 VPS16Q9H269 839 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 SIX2Q9NPC8 291 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 CRTAC1Q9NQ79 661 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 BACE2Q9Y5Z0 518 aa10.49□□□□□ -0.73
CLK3-208ENST00000562626 MYBPHLA2RUH7 354 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 STX10O60499 249 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 HUS1O60921 280 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 ABLIM3O94929 683 aa10.48□□□□□ -0.73
CLK3-208ENST00000562626 PDGFRBP09619 1106 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms