RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 ADGRF2Q8IZF7 708 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 PDCL2Q8N4E4 241 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 PLEKHO2Q8TD55 490 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 MYADMQ96S97 322 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 RTP3Q9BQQ7 232 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 LIMD1Q9UGP4 676 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 YIPF1Q9Y548 306 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 PCDHA5Q9Y5H7 936 aa17.34■□□□□ 0.37
COMMD4-206ENST00000562610 MYH10P35580 1976 aa17.33■□□□□ 0.37
COMMD4-206ENST00000562610 VNN2O95498 520 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 TSPY1Q01534 308 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 DUSP4Q13115 394 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 TRPC3Q13507 836 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 TMEM86AQ8N2M4 240 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 TOP6BLQ8N6T0 577 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 CORO1BQ9BR76 489 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 ZCWPW1Q9H0M4 648 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-206ENST00000562610 GDAP2Q9NXN4 497 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.362e-7■■□□□ 14.4
COMMD4-206ENST00000562610 DNMT3BQ9UBC3 853 aaKnown RBP17.33■□□□□ 0.36
COMMD4-206ENST00000562610 MAFFQ9ULX9 164 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 SORCS3Q9UPU3 1222 aa17.33■□□□□ 0.36
COMMD4-206ENST00000562610 ZNF638Q14966 1978 aaKnown RBP17.33■□□□□ 0.36
COMMD4-206ENST00000562610 RHOP08100 348 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 ACAT1P24752 427 aaKnown RBP17.32■□□□□ 0.36
COMMD4-206ENST00000562610 RPL13P26373 211 aaKnown RBP17.32■□□□□ 0.36
COMMD4-206ENST00000562610 PRCPP42785 496 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 UBE2HP62256 183 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 TNNC1P63316 161 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 MYL7Q01449 175 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 PLD1Q13393 1074 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 MTMR3Q13615 1198 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 NFIL3Q16649 462 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 TMEM31Q5JXX7 168 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 ISM2Q6H9L7 571 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 TTC9BQ8N6N2 239 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 ATAD1Q8NBU5 361 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 PARD3BQ8TEW8 1205 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 TMEM174Q8WUU8 243 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 ING5Q8WYH8 240 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 ZNF516Q92618 1163 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 MMS19Q96T76 1030 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 SEPT5Q99719 369 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-206ENST00000562610 CRISPLD1Q9H336 500 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 DDX43Q9NXZ2 648 aaKnown RBP17.32■□□□□ 0.36
COMMD4-206ENST00000562610 SLC27A5Q9Y2P5 690 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 NUP210Q8TEM1 1887 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-206ENST00000562610 TECTAO75443 2155 aa17.32■□□□□ 0.36
COMMD4-206ENST00000562610 KRT13P13646 458 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 PTPN2P17706 415 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 AP3M2P53677 418 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 DLG4P78352 724 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 ZXDAP98168 799 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 STIM1Q13586 685 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 SOWAHAQ2M3V2 549 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 ZCWPW2Q504Y3 356 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 TDRD10Q5VZ19 366 aaKnown RBP17.31■□□□□ 0.36
COMMD4-206ENST00000562610 IQCEQ6IPM2 695 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 CENPPQ6IPU0 288 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 FAM186BQ8IYM0 893 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 DCP1BQ8IZD4 617 aaKnown RBP17.31■□□□□ 0.36
COMMD4-206ENST00000562610 SPATA20Q8TB22 786 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 ITFG1Q8TB96 612 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 EDAQ92838 391 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 ZNF512Q96ME7 567 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-206ENST00000562610 TSG101Q99816 390 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 C11orf16Q9NQ32 467 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 ABI2Q9NYB9 513 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-206ENST00000562610 EPS15L1Q9UBC2 864 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 MRPS23Q9Y3D9 190 aaKnown RBP17.31■□□□□ 0.36
COMMD4-206ENST00000562610 GREB1Q4ZG55 1949 aa17.31■□□□□ 0.36
COMMD4-206ENST00000562610 SOAT2O75908 522 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 AKAP3O75969 853 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 CST3P01034 146 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-206ENST00000562610 LAMP2P13473 410 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 ALDH1A3P47895 512 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 EPHB3P54753 998 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 MYL6P60660 151 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 ADAM9Q13443 819 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 SLC5A9Q2M3M2 681 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 ZNF699Q32M78 642 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 EDRF1Q3B7T1 1238 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 MGAT5BQ3V5L5 792 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 PDZD4Q76G19 769 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-206ENST00000562610 OSTM1Q86WC4 334 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 ELOA2Q8IYF1 753 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-206ENST00000562610 SPATA18Q8TC71 538 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 FGF13Q92913 245 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 SYAP1Q96A49 352 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-206ENST00000562610 GTPBP4Q9BZE4 634 aaKnown RBP17.3■□□□□ 0.36
COMMD4-206ENST00000562610 SMOC2Q9H3U7 446 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 ASAH2Q9NR71 780 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 CEP72Q9P209 647 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 MAN1B1Q9UKM7 699 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 CDH7Q9ULB5 785 aa17.3■□□□□ 0.36
COMMD4-206ENST00000562610 KMT2EQ8IZD2 1858 aa17.29■□□□□ 0.36
COMMD4-206ENST00000562610 BIN1O00499 593 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms