RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 GMPSP49915 693 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 CDC16Q13042 620 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 CCDC92Q53HC0 331 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 SH3D19Q5HYK7 790 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 TMEM63BQ5T3F8 832 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 CYFIP1Q7L576 1253 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 SYT2Q8N9I0 419 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 IL31RAQ8NI17 732 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 CYTH2Q99418 400 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 INIPQ9NRY2 104 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 DCTN4Q9UJW0 460 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 C2CD2LO14523 706 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 GAS7O60861 476 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 BAG2O95816 211 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ANPEPP15144 967 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ALOX15P16050 662 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ZFXP17010 805 aaPredicted RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 MLH1P40692 756 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 CEP55Q53EZ4 464 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 FKBP1CQ5VVH2 108 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 RINLQ6ZS11 566 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 MTMR14Q8NCE2 650 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 CEP63Q96MT8 703 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ZNF577Q9BSK1 485 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 KCTD10Q9H3F6 313 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 PRDM16Q9HAZ2 1276 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 HACL1Q9UJ83 578 aa14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 MRPL11Q9Y3B7 192 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.79□□□□□ -0.04
GTF3C1-203ENST00000562609 ZNF536O15090 1300 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 BOLA2-SMG1P6H3BVE0 249 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CLIC2O15247 247 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CDH16O75309 829 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CYP3A4P08684 503 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CTNNA2P26232 953 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 HOXD13P35453 343 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 OXCT1P55809 520 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 MAP3K10Q02779 954 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 MTMR2Q13614 643 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 SPARCL1Q14515 664 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 TMED2Q15363 201 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CLUL1Q15846 466 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 OTOAQ7RTW8 1153 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 PRUNE1Q86TP1 453 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 WNK4Q96J92 1243 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 TTC1Q99614 292 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 GRID1Q9ULK0 1009 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 TDRKHQ9Y2W6 561 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 SYNGAP1Q96PV0 1343 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 TCRBV7S2A1N4TA0A589 114 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 TRIM43BA6NCK2 446 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 PSMD10O75832 226 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 HAUS5O94927 633 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CDK4P11802 303 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 NR2F2P24468 414 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 CRABP2P29373 138 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 MARCKSL1P49006 195 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 PLEKHG4Q58EX7 1191 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 ACAD11Q709F0 780 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 GLYCTKQ8IVS8 523 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 KRT35Q92764 455 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 DGCR14Q96DF8 476 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 PTCD3Q96EY7 689 aaKnown RBP14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 BRD8Q9H0E9 1235 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 DEFB129Q9H1M3 183 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 TAS2R1Q9NYW7 299 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 BTBD7Q9P203 1132 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 LGALS13Q9UHV8 139 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 FEM1BQ9UK73 627 aa14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 AJAP1Q9UKB5 411 aaPredicted RBP14.78□□□□□ -0.04
GTF3C1-203ENST00000562609 MAFGO15525 162 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 ZNF862O60290 1169 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 PGM3O95394 542 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 GCNT3O95395 438 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 PYGMP11217 842 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 HSPA6P17066 643 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 COILP38432 576 aaPredicted RBP14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 CD97P48960 835 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 VPS41P49754 854 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 TGFB2P61812 414 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 PRKG1Q13976 671 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 DPY19L2P1Q6NXN4 242 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 B3GNT6Q6ZMB0 384 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 LRRC43Q8N309 656 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 CEP70Q8NHQ1 597 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 LNX1Q8TBB1 728 aaPredicted RBP14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 ARHGEF26Q96DR7 871 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 NSL1Q96IY1 281 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 HSD17B14Q9BPX1 270 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 WDR11Q9BZH6 1224 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 NDE1Q9NXR1 346 aa14.77□□□□□ -0.04
GTF3C1-203ENST00000562609 CCDC160A6NGH7 325 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 SPDYE16A6NNV3 312 aaPredicted RBP14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 USP1O94782 785 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 ITGB5P18084 799 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 MUTP22033 750 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 NMT1P30419 496 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms