RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CES5AQ6NT32 575 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 FRMD5Q7Z6J6 570 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 THEM5Q8N1Q8 247 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 C12orf76Q8N812 135 aaPredicted RBP17.95■□□□□ 0.46
CLK3-207ENST00000562389 OR10T2Q8NGX3 314 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 RTP3Q9BQQ7 232 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 APOL5Q9BWW9 433 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 RHOBTB2Q9BYZ6 727 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 TMEM8AQ9HCN3 771 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 ARMCX3Q9UH62 379 aaPredicted RBP17.95■□□□□ 0.46
CLK3-207ENST00000562389 AFF4Q9UHB7 1163 aaKnown RBP17.95■□□□□ 0.46
CLK3-207ENST00000562389 DACH1Q9UI36 760 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 MAFFQ9ULX9 164 aa17.95■□□□□ 0.46
CLK3-207ENST00000562389 C8AP07357 584 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 HOXA9P31269 272 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 GPR17Q13304 367 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 ZNF699Q32M78 642 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 WDR72Q3MJ13 1102 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 CYP26C1Q6V0L0 522 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 CCDC149Q6ZUS6 474 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 GPR149Q86SP6 731 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 ADGRF2Q8IZF7 708 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 TAF4BQ92750 862 aa17.94■□□□□ 0.46
CLK3-207ENST00000562389 GABRDO14764 452 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 RFPL2O75678 378 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 FGFR1OPO95684 399 aaKnown RBP17.93■□□□□ 0.46
CLK3-207ENST00000562389 GNA14O95837 355 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 HLA-DRAP01903 254 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 POU2F2P09086 479 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 HNRNPA1P09651 372 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLK3-207ENST00000562389 FAM163BP0C2L3 166 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 OR4Q2P0C623 313 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 PIK3CAP42336 1068 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 MTHFRP42898 656 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 LHX1P48742 406 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 MXI1P50539 228 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 TNNC1P63316 161 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 SGSM1Q2NKQ1 1148 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 CCDC40Q4G0X9 1142 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 DCAF17Q5H9S7 520 aaPredicted RBP17.93■□□□□ 0.46
CLK3-207ENST00000562389 CT47A1Q5JQC4 288 aaPredicted RBP17.93■□□□□ 0.46
CLK3-207ENST00000562389 TCERG1LQ5VWI1 586 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 KRT39Q6A163 491 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 TMC5Q6UXY8 1006 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 OSTM1Q86WC4 334 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 TCEAL8Q8IYN2 117 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 SLC7A14Q8TBB6 771 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 SLC35C1Q96A29 364 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 RIPOR3Q96MK2 946 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 NECTIN4Q96NY8 510 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 MED15Q96RN5 788 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 TMEM209Q96SK2 561 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 SRRTQ9BXP5 876 aaKnown RBP17.93■□□□□ 0.46
CLK3-207ENST00000562389 ZCWPW1Q9H0M4 648 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 MMRN2Q9H8L6 949 aa17.93■□□□□ 0.46
CLK3-207ENST00000562389 DDX43Q9NXZ2 648 aaKnown RBP17.93■□□□□ 0.46
CLK3-207ENST00000562389 CCDC195A0A1B0GUA6 201 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 TACC1O75410 805 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 ASS1P00966 412 aaKnown RBP17.92■□□□□ 0.46
CLK3-207ENST00000562389 PTMSP20962 102 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 WARSP23381 471 aaKnown RBP17.92■□□□□ 0.46
CLK3-207ENST00000562389 ERCC5P28715 1186 aaPredicted RBP17.92■□□□□ 0.46
CLK3-207ENST00000562389 ELF1P32519 619 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 MARSP56192 900 aaKnown RBP17.92■□□□□ 0.46
CLK3-207ENST00000562389 MYL7Q01449 175 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 ADCY1Q08828 1119 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 CBX2Q14781 532 aaPredicted RBP17.92■□□□□ 0.46
CLK3-207ENST00000562389 ZNF667Q5HYK9 610 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 PPM1LQ5SGD2 360 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 RNF19BQ6ZMZ0 732 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 TAS1R2Q8TE23 839 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 KBTBD7Q8WVZ9 684 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 ZNF707Q96C28 371 aaPredicted RBP17.92■□□□□ 0.46
CLK3-207ENST00000562389 MMS19Q96T76 1030 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 ACBD6Q9BR61 282 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 PRKD2Q9BZL6 878 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 TMEM63CQ9P1W3 806 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 PRKAG3Q9UGI9 489 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 UNC80Q8N2C7 3258 aa17.92■□□□□ 0.46
CLK3-207ENST00000562389 MTMR11A4FU01 709 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 VNN2O95498 520 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 TSPY1Q01534 308 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 SMARCB1Q12824 385 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 ATAT1Q5SQI0 421 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 DCP1BQ8IZD4 617 aaKnown RBP17.91■□□□□ 0.46
CLK3-207ENST00000562389 FEZF2Q8TBJ5 459 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 ADAMTS19Q8TE59 1207 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 IMPG2Q9BZV3 1241 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 CYP4F11Q9HBI6 524 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 HSFX1Q9UBD0 423 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 NXF1Q9UBU9 619 aaKnown RBP17.91■□□□□ 0.46
CLK3-207ENST00000562389 CDH22Q9UJ99 828 aa17.91■□□□□ 0.46
CLK3-207ENST00000562389 PRRG1O14668 218 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 CLSTN1O94985 981 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 SEC24AO95486 1093 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 WEE2P0C1S8 567 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 CCDC192P0DO97 292 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 P4HA1P13674 534 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 PCSK1P29120 753 aa17.9■□□□□ 0.46
CLK3-207ENST00000562389 CBWD6Q4V339 395 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms