RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PAX3P23760 479 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 GABRR2P28476 465 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ABCD1P33897 745 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MLLT6P55198 1093 aaPredicted RBP18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 GAS6Q14393 721 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SLC39A12Q504Y0 691 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 WDR44Q5JSH3 913 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CRELD2Q6UXH1 353 aaPredicted RBP18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SFR1Q86XK3 245 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ARID3BQ8IVW6 561 aaPredicted RBP18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 LPIN3Q9BQK8 851 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 IER2Q9BTL4 223 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 FAM126AQ9BYI3 521 aaPredicted RBP18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ZCWPW1Q9H0M4 648 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ATXN3LQ9H3M9 355 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DLL3Q9NYJ7 618 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 AGO2Q9UKV8 859 aaKnown RBP18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CLIC4Q9Y696 253 aa18.07■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MED19A0JLT2 244 aaPredicted RBP18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SLC38A8A6NNN8 435 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CHADO15335 359 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PPP1R37O75864 691 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ADSSP30520 456 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SOX9P48436 509 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PTPAQ15257 358 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SLFN12LQ6IEE8 588 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DYMQ7RTS9 669 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ZNF720Q7Z2F6 126 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DGLUCYQ7Z3D6 616 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 YAF2Q8IY57 180 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 EFCAB13Q8IY85 973 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 KRI1Q8N9T8 703 aaKnown RBP18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CSGALNACT1Q8TDX6 532 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ZFYVE19Q96K21 471 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SEPT5Q99719 369 aaPredicted RBP18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 UPF2Q9HAU5 1272 aaKnown RBP18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DPP3Q9NY33 737 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 GPR179Q6PRD1 2367 aa18.06■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 VPS37CA5D8V6 355 aaPredicted RBP18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CYB561D2O14569 222 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PRAMEF12O95522 483 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CCR3P51677 355 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 WNT7BP56706 349 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SATB1Q01826 763 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 KCNA1Q09470 495 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PUM1Q14671 1186 aaKnown RBP eCLIP18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MGAT5BQ3V5L5 792 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 GPR158Q5T848 1215 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TXNDC11Q6PKC3 985 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ITIH5Q86UX2 942 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 LRRTM3Q86VH5 581 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MSANTD3Q96H12 275 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PYM1Q9BRP8 204 aaKnown RBP18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 STRA6Q9BX79 667 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 IL21Q9HBE4 155 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 RBM12Q9NTZ6 932 aaKnown RBP18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 FBXO2Q9UK22 296 aaPredicted RBP18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DSEQ9UL01 958 aa18.05■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TCHHQ07283 1943 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 FGF19O95750 216 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TUFMP49411 452 aaKnown RBP18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TAF6P49848 677 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 KPNA1P52294 538 aaPredicted RBP18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CYP4F8P98187 520 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 POU5F1Q01860 360 aaKnown RBP18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 RSPO4Q2I0M5 234 aaPredicted RBP18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 WSCD1Q658N2 575 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TTC8Q8TAM2 541 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 FAM200AQ8TCP9 573 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 POMGNT1Q8WZA1 660 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 HVCN1Q96D96 273 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 GTSE1Q9NYZ3 720 aa18.04■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 KIF26AQ9ULI4 1882 aaPredicted RBP18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MYBPHLA2RUH7 354 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 MYMKA6NI61 221 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 SPECC1L-ADORA2AF8WAN1 911 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TGM1P22735 817 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CTHP32929 405 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 NRLP54845 237 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CUL4AQ13619 759 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 PPP2R5DQ14738 602 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ARHGAP15Q53QZ3 475 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 C1orf228Q6PIY5 440 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 METTL23Q86XA0 190 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 ZSWIM2Q8NEG5 633 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 GIPC2Q8TF65 315 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DNAJC19Q96DA6 116 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 C8orf33Q9H7E9 229 aaPredicted RBP18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 OBP2AQ9NY56 170 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 STK17AQ9UEE5 414 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 F5P12259 2224 aa18.03■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DPYSL4O14531 572 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 HAPLN1P10915 354 aaPredicted RBP18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 WEE1P30291 646 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CXCL12P48061 93 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 CASP5P51878 434 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 TNK2Q07912 1038 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 DMWDQ09019 674 aa18.02■□□□□ 0.48
VPS9D1-AS1-201ENST00000562298 VEPH1Q14D04 833 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms