RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SASS6Q6UVJ0 657 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 OSTM1Q86WC4 334 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 FBXL13Q8NEE6 735 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 ZNF461Q8TAF7 563 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 LMO3Q8TAP4 145 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 SUSD6Q92537 303 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 SEMA4DQ92854 862 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 CNOT6LQ96LI5 555 aaKnown RBP14.41□□□□□ -0.1
CDH1-204ENST00000562118 ZCWPW1Q9H0M4 648 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 PLEKHA4Q9H4M7 779 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 APOBEC3GQ9HC16 384 aaKnown RBP14.41□□□□□ -0.1
CDH1-204ENST00000562118 PRDM6Q9NQX0 595 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 NME7Q9Y5B8 376 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 TIMM13Q9Y5L4 95 aaPredicted RBP14.41□□□□□ -0.1
CDH1-204ENST00000562118 SNX9Q9Y5X1 595 aa14.41□□□□□ -0.1
CDH1-204ENST00000562118 N4BP1O75113 896 aaKnown RBP14.4□□□□□ -0.1
CDH1-204ENST00000562118 CCDC192P0DO97 292 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 PRKCSHP14314 528 aaPredicted RBP14.4□□□□□ -0.1
CDH1-204ENST00000562118 ATF2P15336 505 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 ZNF18P17022 549 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 KLRC2P26717 231 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 OR1D2P34982 312 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 ASPAP45381 313 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 INCA1Q0VD86 236 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 GPR17Q13304 367 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 BIRC3Q13489 604 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 TRPC3Q13507 836 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 ZNF699Q32M78 642 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 CTXN3Q4LDR2 81 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 SMYD5Q6GMV2 418 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 CYP26C1Q6V0L0 522 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 ACBD6Q9BR61 282 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 RAB20Q9NX57 234 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 CLDND1Q9NY35 253 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 THEGQ9P2T0 379 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 BARX2Q9UMQ3 279 aaPredicted RBP14.4□□□□□ -0.1
CDH1-204ENST00000562118 GREB1Q4ZG55 1949 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 PATJQ8NI35 1801 aa14.4□□□□□ -0.1
CDH1-204ENST00000562118 GTPBP10A4D1E9 387 aaKnown RBP14.39□□□□□ -0.11
CDH1-204ENST00000562118 HUS1O60921 280 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 SRGAP2BP0DMP2 458 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 PIK3CAP42336 1068 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 LHX1P48742 406 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 NOP14P78316 857 aaKnown RBP14.39□□□□□ -0.11
CDH1-204ENST00000562118 SMARCB1Q12824 385 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 UVSSAQ2YD98 709 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 WDR72Q3MJ13 1102 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 CCDC40Q4G0X9 1142 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 DCAF17Q5H9S7 520 aaPredicted RBP14.39□□□□□ -0.11
CDH1-204ENST00000562118 MIIPQ5JXC2 388 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 FAM171BQ6P995 826 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 TCEAL8Q8IYN2 117 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 ADGRF2Q8IZF7 708 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.39□□□□□ -0.11
CDH1-204ENST00000562118 ATXN2LQ8WWM7 1075 aaKnown RBP14.39□□□□□ -0.11
CDH1-204ENST00000562118 SDCBP2Q9H190 292 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 SFXN1Q9H9B4 322 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 MAN1C1Q9NR34 630 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 ZDHHC7Q9NXF8 308 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 AFF4Q9UHB7 1163 aaKnown RBP14.39□□□□□ -0.11
CDH1-204ENST00000562118 DPP7Q9UHL4 492 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 NFE2L3Q9Y4A8 694 aa14.39□□□□□ -0.11
CDH1-204ENST00000562118 PHACTR2O75167 634 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 LRRN2O75325 713 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 EEF1GP26641 437 aaKnown RBP14.38□□□□□ -0.11
CDH1-204ENST00000562118 MYL5Q02045 173 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 KCNH2Q12809 1159 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 SMAD4Q13485 552 aaKnown RBP14.38□□□□□ -0.11
CDH1-204ENST00000562118 ZSCAN23Q3MJ62 389 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 ZNF667Q5HYK9 610 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 LRRTM3Q86VH5 581 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 FAM114A1Q8IWE2 563 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 UBR7Q8N806 425 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 KREMEN2Q8NCW0 462 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 C2orf15Q8WU43 125 aaKnown RBP14.38□□□□□ -0.11
CDH1-204ENST00000562118 ZNF707Q96C28 371 aaPredicted RBP14.38□□□□□ -0.11
CDH1-204ENST00000562118 TMEM209Q96SK2 561 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 MRPL45Q9BRJ2 306 aaKnown RBP14.38□□□□□ -0.11
CDH1-204ENST00000562118 NIF3L1Q9GZT8 377 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 DNAJC25Q9H1X3 360 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 IGFLR1Q9H665 355 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 CYP3A43Q9HB55 503 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 SAMSN1Q9NSI8 373 aaKnown RBP14.38□□□□□ -0.11
CDH1-204ENST00000562118 POLIQ9UNA4 740 aa14.38□□□□□ -0.11
CDH1-204ENST00000562118 DENND4CQ5VZ89 1909 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 MTMR11A4FU01 709 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 LRRC10BA6NIK2 292 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 MBTPS2O43462 519 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 ZMYND10O75800 440 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 AFPP02771 609 aaKnown RBP14.37□□□□□ -0.11
CDH1-204ENST00000562118 HNRNPA1P09651 372 aaKnown RBP eCLIP14.37□□□□□ -0.11
CDH1-204ENST00000562118 KCNA5P22460 613 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 TNNC1P63316 161 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 MYL7Q01449 175 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 ITIH3Q06033 890 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 MAN2A1Q16706 1144 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 PUS10Q3MIT2 529 aaKnown RBP14.37□□□□□ -0.11
CDH1-204ENST00000562118 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 TCP11X2Q5H9J9 407 aa14.37□□□□□ -0.11
CDH1-204ENST00000562118 INTS6LQ5JSJ4 861 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms