RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 TUBA3CQ13748 450 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 TAPT1Q6NXT6 567 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 TUBA3EQ6PEY2 450 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.9□□□□□ -1.3
DENND4A-204ENST00000562028 POC1BQ8TC44 478 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 ZNF483Q8TF39 744 aaPredicted RBP6.9□□□□□ -1.3
DENND4A-204ENST00000562028 PHKBQ93100 1093 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 LENG9Q96B70 501 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 ZNF287Q9HBT7 754 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 CPNE7Q9UBL6 633 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 OGDHLQ9ULD0 1010 aa6.9□□□□□ -1.3
DENND4A-204ENST00000562028 A0A1W2PS29 197 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 FOXN3O00409 490 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 PMM2O15305 246 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 MAP4K4O95819 1239 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 SLC5A1P13866 664 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 DDX6P26196 483 aaKnown RBP eCLIP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 DGCR2P98153 550 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 RESTQ13127 1097 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 SLC13A2Q13183 592 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 CYP2A13Q16696 494 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 LMBRD2Q68DH5 695 aaPredicted RBP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 TMPRSS9Q7Z410 1059 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 CLNKQ7Z7G1 428 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 SYNE4Q8N205 404 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 FAM46DQ8NEK8 389 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 HAS1Q92839 578 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 FUBP1Q96AE4 644 aaKnown RBP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 NMD3Q96D46 503 aaKnown RBP6.89□□□□□ -1.31
DENND4A-204ENST00000562028 LRIG1Q96JA1 1093 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 SPATA5L1Q9BVQ7 753 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 APOL5Q9BWW9 433 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 ALOXE3Q9BYJ1 711 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 SMURF2Q9HAU4 748 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 GALNT9Q9HCQ5 603 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 GPRC5BQ9NZH0 403 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 MYRFQ9Y2G1 1151 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 MAP3K2Q9Y2U5 619 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 TMX2Q9Y320 296 aa6.89□□□□□ -1.31
DENND4A-204ENST00000562028 PRAMEF33A0A0G2JMD5 474 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 PRAMEF10O60809 474 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 SOAT2O75908 522 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 CDKL5O76039 1030 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 SUN1O94901 812 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 SLC11A2P49281 568 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 ANXA11P50995 505 aaKnown RBP6.88□□□□□ -1.31
DENND4A-204ENST00000562028 UCP3P55916 312 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 CTBP1Q13363 440 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 PICALMQ13492 652 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 TIGD2Q4W5G0 525 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 SLC44A4Q53GD3 710 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 RHOUQ7L0Q8 258 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 NSUN7Q8NE18 718 aaKnown RBP6.88□□□□□ -1.31
DENND4A-204ENST00000562028 NACC2Q96BF6 587 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 RNF31Q96EP0 1072 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 MSLNLQ96KJ4 702 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 ADAM2Q99965 735 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
DENND4A-204ENST00000562028 ZNF518BQ9C0D4 1074 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 ZNF700Q9H0M5 742 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 MRPS18AQ9NVS2 196 aaKnown RBP6.88□□□□□ -1.31
DENND4A-204ENST00000562028 STK32BQ9NY57 414 aa6.88□□□□□ -1.31
DENND4A-204ENST00000562028 AFF4Q9UHB7 1163 aaKnown RBP6.88□□□□□ -1.31
DENND4A-204ENST00000562028 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 A0A087WWL8 130 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 TRIM43BA6NCK2 446 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 MYO1CO00159 1063 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 VIPR2P41587 438 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 TOB1P50616 345 aaPredicted RBP6.87□□□□□ -1.31
DENND4A-204ENST00000562028 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 RPS7P62081 194 aaKnown RBP6.87□□□□□ -1.31
DENND4A-204ENST00000562028 DYRK1AQ13627 763 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 RAB32Q13637 225 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 LSM12Q3MHD2 195 aaKnown RBP6.87□□□□□ -1.31
DENND4A-204ENST00000562028 COLGALT2Q8IYK4 626 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 DNAJC5GQ8N7S2 189 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 PSD4Q8NDX1 1056 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 MAML1Q92585 1016 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 TRIM43Q96BQ3 446 aaPredicted RBP6.87□□□□□ -1.31
DENND4A-204ENST00000562028 MOGAT1Q96PD6 335 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 STRBPQ96SI9 672 aaKnown RBP6.87□□□□□ -1.31
DENND4A-204ENST00000562028 HEPHQ9BQS7 1158 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 NRDE2Q9H7Z3 1164 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 SACM1LQ9NTJ5 587 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 XPR1Q9UBH6 696 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 HESX1Q9UBX0 185 aa6.87□□□□□ -1.31
DENND4A-204ENST00000562028 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
DENND4A-204ENST00000562028 RHPN2P1A8MT19 583 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 TOR1BO14657 336 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 VPS4BO75351 444 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 ZFPL1O95159 310 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 FOSP01100 380 aaPredicted RBP6.86□□□□□ -1.31
DENND4A-204ENST00000562028 CYP2C9P11712 490 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 XRCC6P12956 609 aaKnown RBP eCLIP6.86□□□□□ -1.31
DENND4A-204ENST00000562028 BUD31P41223 144 aaPredicted RBP6.86□□□□□ -1.31
DENND4A-204ENST00000562028 VAV2P52735 878 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 WNT3P56703 355 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 GUCY1B3Q02153 619 aa6.86□□□□□ -1.31
DENND4A-204ENST00000562028 HDAC1Q13547 482 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms