RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 METRNLQ641Q3 311 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 C1orf228Q6PIY5 440 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 SYNE4Q8N205 404 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 OR2C3Q8N628 320 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 IL17RDQ8NFM7 739 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 MAML1Q92585 1016 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 LARP4BQ92615 738 aaKnown RBP7.71□□□□□ -1.18
SMG1-204ENST00000561940 KIAA1191Q96A73 305 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 PACSIN1Q9BY11 444 aa7.71□□□□□ -1.18
SMG1-204ENST00000561940 SIDT1Q9NXL6 827 aaKnown RBP7.71□□□□□ -1.18
SMG1-204ENST00000561940 POM121BA6NF01 834 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 CYR61O00622 381 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 LPXNO60711 386 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 SLC43A1O75387 559 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 EIF3JO75822 258 aaKnown RBP7.7□□□□□ -1.18
SMG1-204ENST00000561940 PEX11BO96011 259 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 ITGB1P05556 798 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 MTHFD1P11586 935 aaKnown RBP7.7□□□□□ -1.18
SMG1-204ENST00000561940 ARFIP2P53365 341 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 PSMC1P62191 440 aaKnown RBP7.7□□□□□ -1.18
SMG1-204ENST00000561940 TIGD2Q4W5G0 525 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 ZNF627Q7L945 461 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 MRGPREQ86SM8 312 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 MLST8Q9BVC4 326 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 PCED1AQ9H1Q7 454 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 AKIP1Q9NQ31 210 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 SACM1LQ9NTJ5 587 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 CHST2Q9Y4C5 530 aa7.7□□□□□ -1.18
SMG1-204ENST00000561940 ABHD14A-ACY1A0A1B0GW23 586 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 CDHR4A6H8M9 788 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 ISM1B1AKI9 464 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 IFRD1O00458 451 aaPredicted RBP7.69□□□□□ -1.18
SMG1-204ENST00000561940 PRSS23O95084 383 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 GJB1P08034 283 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 GNAI3P08754 354 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 TSHRP16473 764 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 LAG3P18627 525 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 PTGS2P35354 604 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 KCNJ5P48544 419 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 GNAI1P63096 354 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 KIF22Q14807 665 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 EMC10Q5UCC4 262 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 ZNF365Q70YC5 407 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 SORCS2Q96PQ0 1159 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 MRIQ9BWK5 157 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 SLC46A2Q9BY10 475 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 GSTO2Q9H4Y5 243 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.69□□□□□ -1.18
SMG1-204ENST00000561940 GNL3LQ9NVN8 582 aaKnown RBP7.69□□□□□ -1.18
SMG1-204ENST00000561940 ZDHHC8Q9ULC8 765 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 MED16Q9Y2X0 877 aa7.69□□□□□ -1.18
SMG1-204ENST00000561940 ZNF785A8K8V0 405 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 RNASET2O00584 256 aaKnown RBP7.68□□□□□ -1.18
SMG1-204ENST00000561940 HAUS5O94927 633 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 SETSIPP0DME0 302 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 STT3AP46977 705 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 TRAPPC10P48553 1259 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 STK3Q13188 491 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 FAM83BQ5T0W9 1011 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 KLHDC7AQ5VTJ3 777 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 DEPTORQ8TB45 409 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 PROKR1Q8TCW9 393 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 KBTBD7Q8WVZ9 684 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 ZSWIM1Q9BR11 485 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 BRD9Q9H8M2 597 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 SMURF2Q9HAU4 748 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 MRPS18AQ9NVS2 196 aaKnown RBP7.68□□□□□ -1.18
SMG1-204ENST00000561940 JKAMPQ9P055 326 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 COL20A1Q9P218 1284 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 ANKFY1Q9P2R3 1169 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 FZD1Q9UP38 647 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 ATP11BQ9Y2G3 1177 aa7.68□□□□□ -1.18
SMG1-204ENST00000561940 UNC119BA6NIH7 251 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 ABHD16AO95870 558 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 ABCB4P21439 1286 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 RPS16P62249 146 aaKnown RBP7.67□□□□□ -1.18
SMG1-204ENST00000561940 LONRF3Q496Y0 759 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 CRB2Q5IJ48 1285 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 FAM209BQ5JX69 171 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 UTP14CQ5TAP6 766 aaKnown RBP7.67□□□□□ -1.18
SMG1-204ENST00000561940 ERAP2Q6P179 960 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 KCNV1Q6PIU1 500 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 VRK3Q8IV63 474 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 CCDC33Q8N5R6 958 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 ACRBPQ8NEB7 543 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 TMIEQ8NEW7 156 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 OR56A1Q8NGH5 318 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 AFF4Q9UHB7 1163 aaKnown RBP7.67□□□□□ -1.18
SMG1-204ENST00000561940 CDC23Q9UJX2 597 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 AGAP1Q9UPQ3 857 aa7.67□□□□□ -1.18
SMG1-204ENST00000561940 CENPVL1A0A0U1RR11 272 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 TMEM233B4DJY2 109 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 BTN3A1O00481 513 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 DNAJB5O75953 348 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 AGFG2O95081 481 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 RARBP10826 455 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 ZNF135P52742 658 aaPredicted RBP7.66□□□□□ -1.18
SMG1-204ENST00000561940 HMGA2P52926 109 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 CHAF1AQ13111 956 aaPredicted RBP7.66□□□□□ -1.18
SMG1-204ENST00000561940 PMS2P11Q13670 270 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms