RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 C22orf31O95567 290 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 HOXC6P09630 235 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 WEE2P0C1S8 567 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 P4HA1P13674 534 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 TMOD1P28289 359 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 MDH1P40925 334 aaKnown RBP10.3□□□□□ -0.76
RTF1-206ENST00000560447 RPL21P46778 160 aaKnown RBP10.3□□□□□ -0.76
RTF1-206ENST00000560447 PPP2R2AP63151 447 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 KLF1Q13351 362 aaPredicted RBP10.3□□□□□ -0.76
RTF1-206ENST00000560447 MAMLD1Q13495 774 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 ACAP1Q15027 740 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 PCBP1Q15365 356 aaKnown RBP eCLIP10.3□□□□□ -0.76
RTF1-206ENST00000560447 PROX2Q3B8N5 592 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 ZNF792Q3KQV3 632 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 HSDL1Q3SXM5 330 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 ZNF568Q3ZCX4 644 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 DNAJC21Q5F1R6 531 aaKnown RBP10.3□□□□□ -0.76
RTF1-206ENST00000560447 C6orf118Q5T5N4 469 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 LMBRD2Q68DH5 695 aaPredicted RBP10.3□□□□□ -0.76
RTF1-206ENST00000560447 SPOPLQ6IQ16 392 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 TTC27Q6P3X3 843 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 POLNQ7Z5Q5 900 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 LINC01465Q8N7H1 131 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 CCDC89Q8N998 374 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 FBXO25Q8TCJ0 367 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 CPA5Q8WXQ8 436 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 TLCD1Q96CP7 247 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 SNF8Q96H20 258 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 BCO2Q9BYV7 579 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 DCLK3Q9C098 648 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 MIS12Q9H081 205 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 RPF1Q9H9Y2 349 aaKnown RBP10.3□□□□□ -0.76
RTF1-206ENST00000560447 MORF4L1Q9UBU8 362 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 RABGEF1Q9UJ41 708 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 SNX24Q9Y343 169 aa10.3□□□□□ -0.76
RTF1-206ENST00000560447 TCRBV5S1A1TA0A578 114 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 IQCA1LA6NCM1 817 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 EBAG9O00559 213 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 TLR3O15455 904 aaKnown RBP10.29□□□□□ -0.76
RTF1-206ENST00000560447 SORBS3O60504 671 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 AGTP01019 485 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 CETPP11597 493 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
RTF1-206ENST00000560447 EPHX2P34913 555 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 PLTPP55058 493 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 FKBP1BP68106 108 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 ARHGAP1Q07960 439 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 IFFO1Q0D2I5 559 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 DRP2Q13474 957 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
RTF1-206ENST00000560447 PPP1R7Q15435 360 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 ZNF699Q32M78 642 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 KRT71Q3SY84 523 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 ZBTB41Q5SVQ8 909 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 EFCAB12Q6NXP0 572 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 RHBDF2Q6PJF5 856 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 MAMDC4Q6UXC1 1216 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 THSD4Q6ZMP0 1018 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 MICALCLQ6ZW33 695 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 ARMCX2Q7L311 632 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
RTF1-206ENST00000560447 RELL1Q8IUW5 271 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 ZDHHC14Q8IZN3 488 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 GPRC5AQ8NFJ5 357 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 PPTC7Q8NI37 304 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 IPO4Q8TEX9 1081 aaKnown RBP10.29□□□□□ -0.76
RTF1-206ENST00000560447 CLMNQ96JQ2 1002 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 C11orf70Q9BRQ4 267 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 PHACTR1Q9C0D0 580 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 EPN3Q9H201 632 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 CDT1Q9H211 546 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 TXNRD2Q9NNW7 524 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 CISHQ9NSE2 258 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 PLA2G2EQ9NZK7 142 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 SLC12A6Q9UHW9 1150 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 KIAA1257Q9ULG3 409 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 DRG1Q9Y295 367 aaKnown RBP10.29□□□□□ -0.76
RTF1-206ENST00000560447 ATP8A1Q9Y2Q0 1164 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 DERAQ9Y315 318 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 CITO14578 2027 aa10.29□□□□□ -0.76
RTF1-206ENST00000560447 KAT6AQ92794 2004 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 INO80B-WBP1J3KQ70 363 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 TCEA3O75764 348 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 TJP3O95049 919 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
RTF1-206ENST00000560447 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 ATP5DP30049 168 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 LSP1P33241 339 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 FLT3P36888 993 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 TNFSF9P41273 254 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 MYL6P60660 151 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 STILQ15468 1287 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 PTGISQ16647 500 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 Q3C1V9 767 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 ZNF667Q5HYK9 610 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 C9orf131Q5VYM1 1079 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 AADACL2Q6P093 401 aa10.28□□□□□ -0.76
RTF1-206ENST00000560447 DNAJC24Q6P3W2 148 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms