RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 GDAP2Q9NXN4 497 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 ARHGAP20Q9P2F6 1191 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 STK39Q9UEW8 545 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 TUBGCP4Q9UGJ1 667 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 DSEQ9UL01 958 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 KIAA1257Q9ULG3 409 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 CNTN6Q9UQ52 1028 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 RWDD3Q9Y3V2 267 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 SNX9Q9Y5X1 595 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 CHD7Q9P2D1 2997 aa6.87□□□□□ -1.31
SPG11-221ENST00000560299 SCN5AQ14524 2016 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 MICAL3Q7RTP6 2002 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 MEIS3P2A8K0S8 358 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 C5orf67F2Z3F1 127 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 PODXLO00592 558 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 CYP26A1O43174 497 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 KRT86O43790 486 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 B3GAT3O94766 335 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 POMCP01189 267 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 TUBB4AP04350 444 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 ALDH2P05091 517 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 RB1P06400 928 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 PAEPP09466 180 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 WEE2P0C1S8 567 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 CD58P19256 250 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 GNA15P30679 374 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 CLCN1P35523 988 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 GNL1P36915 607 aaPredicted RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 ASPAP45381 313 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 LHX1P48742 406 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 GUCY2FP51841 1108 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 KIF5AQ12840 1032 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 STILQ15468 1287 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 UPP1Q16831 310 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 ARHGAP29Q52LW3 1261 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 HGSNATQ68CP4 663 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 RAD9BQ6WBX8 426 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 SCARA5Q6ZMJ2 495 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 TRIM72Q6ZMU5 477 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 KIAA1328Q86T90 577 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 UNC93AQ86WB7 457 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 TMEM86AQ8N2M4 240 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 RBBP8NLQ8NC74 664 aaPredicted RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 GSTCDQ8NEC7 633 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 OR6B3Q8NGW1 331 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 CXorf38Q8TB03 319 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 SPATA18Q8TC71 538 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 CLP1Q92989 425 aaKnown RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 KAT5Q92993 513 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 ZNF689Q96CS4 500 aaPredicted RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 FAM84AQ96KN4 292 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 TNIP3Q96KP6 325 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 AGPAT1Q99943 283 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 COLEC11Q9BWP8 271 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 PLVAPQ9BX97 442 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 NT5C1AQ9BXI3 368 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 TSGA10Q9BZW7 698 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 GPR88Q9GZN0 384 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 MIOSQ9NXC5 875 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 CXXC1Q9P0U4 656 aaPredicted RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 ADAMTS1Q9UHI8 967 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 PUF60Q9UHX1 559 aaKnown RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 MSRAQ9UJ68 235 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 AJAP1Q9UKB5 411 aaPredicted RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 PYCARDQ9ULZ3 195 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 BARX2Q9UMQ3 279 aaPredicted RBP6.86□□□□□ -1.31
SPG11-221ENST00000560299 ADGRG1Q9Y653 693 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 SCN1AP35498 2009 aa6.86□□□□□ -1.31
SPG11-221ENST00000560299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.85□□□□□ -1.31
SPG11-221ENST00000560299 CASTOR2A6NHX0 329 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 TBKBP1A7MCY6 615 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 RBAK-RBAKDNI3L0D1 243 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 KIF2AO00139 706 aaPredicted RBP6.85□□□□□ -1.31
SPG11-221ENST00000560299 CYB561D2O14569 222 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 THAP12O43422 761 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 CILPO75339 1184 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 TACC1O75410 805 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 TADA2AO75478 443 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 DGKIO75912 1065 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 UPP2O95045 317 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 SLC34A2O95436 690 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 LCA5LO95447 670 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 C1RP00736 705 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 PLEKP08567 350 aaPredicted RBP6.85□□□□□ -1.31
SPG11-221ENST00000560299 FGFR1P11362 822 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 ODC1P11926 461 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 GZMAP12544 262 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 CYP11B1P15538 503 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 ACO1P21399 889 aaKnown RBP6.85□□□□□ -1.31
SPG11-221ENST00000560299 MAGEA1P43355 309 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 OR1G1P47890 313 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 ALDH7A1P49419 539 aaKnown RBP6.85□□□□□ -1.31
SPG11-221ENST00000560299 CLCNKBP51801 687 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 SNX16P57768 344 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 CDR2Q01850 454 aa6.85□□□□□ -1.31
SPG11-221ENST00000560299 SOX4Q06945 474 aaPredicted RBP6.85□□□□□ -1.31
SPG11-221ENST00000560299 INCA1Q0VD86 236 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms