RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 DDX12PQ92771 950 aa9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 C18orf25Q96B23 403 aaPredicted RBP9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 PRIMPOLQ96LW4 560 aa9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 LRRC3Q9BY71 257 aa9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 DNAJC25Q9H1X3 360 aa9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 SH3GLB2Q9NR46 395 aa9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 THG1LQ9NWX6 298 aaKnown RBP9.81□□□□□ -0.84
SNRPA1-208ENST00000559686 SYN3O14994 580 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 VNN2O95498 520 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 HARSP12081 509 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 IFNAR1P17181 557 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ENGP17813 658 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ATP2B1P20020 1258 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 MARCKSP29966 332 aaPredicted RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 RDXP35241 583 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ALDH1A3P47895 512 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 MCM2P49736 904 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 GALK1P51570 392 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 AAMPQ13685 434 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 RUNX3Q13761 415 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 MRPL58Q14197 206 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 PTPAQ15257 358 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 DCAF4L1Q3SXM0 396 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ARHGAP15Q53QZ3 475 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ANO7Q6IWH7 933 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 PIK3AP1Q6ZUJ8 805 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 GAREM2Q75VX8 874 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 KRT25Q7Z3Z0 450 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 NEK8Q86SG6 692 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 TRIM22Q8IYM9 498 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 TTC9BQ8N6N2 239 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 DEPTORQ8TB45 409 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 JAKMIP1Q96N16 626 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ZMAT2Q96NC0 199 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 TBC1D32Q96NH3 1257 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 GTPBP2Q9BX10 602 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 NUSAP1Q9BXS6 441 aaKnown RBP9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 HPS4Q9NQG7 708 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ANKEF1Q9NU02 776 aa9.8□□□□□ -0.84
SNRPA1-208ENST00000559686 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 NID2Q14112 1375 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 ABCA7Q8IZY2 2146 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 ACKR2O00590 384 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 BAG4O95429 457 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CFIP05156 583 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 ATXN3P54252 364 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 YARSP54577 528 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 SEC13P55735 322 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 PLD1Q13393 1074 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 NPY5RQ15761 445 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 FAM187BQ17R55 369 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 USP39Q53GS9 565 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 NT5DC1Q5TFE4 455 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 ATF7IP2Q5U623 682 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CDCA2Q69YH5 1023 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 DNAJB7Q7Z6W7 309 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 TMEFF1Q8IYR6 380 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 PNPLA1Q8N8W4 532 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 TSTD1Q8NFU3 115 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 RLN3Q8WXF3 142 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CRELD1Q96HD1 420 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CAMK1GQ96NX5 476 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 LPIN3Q9BQK8 851 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 LARP6Q9BRS8 491 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CCDC94Q9BW85 323 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CCDC113Q9H0I3 377 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 C2orf40Q9H1Z8 148 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CCDC86Q9H6F5 360 aaKnown RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 MBD1Q9UIS9 605 aaPredicted RBP9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 CCL26Q9Y258 94 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 RAXQ9Y2V3 346 aa9.79□□□□□ -0.84
SNRPA1-208ENST00000559686 TNRC6BQ9UPQ9 1833 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 ANTXRLA6NF34 631 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 TRDMT1O14717 391 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 CAPNS1P04632 268 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 HMGB1P09429 215 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 GCFC2P16383 781 aaKnown RBP9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 YWHAHQ04917 246 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 LMAN2Q12907 356 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 KRT32Q14532 448 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 SYT13Q7L8C5 426 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 HDDC3Q8N4P3 179 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 DEFB119Q8N690 84 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 ATAD1Q8NBU5 361 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 APPL2Q8NEU8 664 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 OR2I1PQ8NGU4 316 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 GIPC2Q8TF65 315 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 EZH1Q92800 747 aaPredicted RBP9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 SUSD3Q96L08 255 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 GCNAQ96QF7 691 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 P2RY13Q9BPV8 354 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 TASP1Q9H6P5 420 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 GJB4Q9NTQ9 266 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 TMEM74BQ9NUR3 256 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 SLC38A7Q9NVC3 462 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 TPCN1Q9ULQ1 816 aa9.78□□□□□ -0.84
SNRPA1-208ENST00000559686 PCDHA12Q9UN75 941 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms