RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 HIP1RO75146 1068 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ECI2O75521 394 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 BMP15O95972 392 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 RHOP08100 348 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 CCDC175P0C221 793 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 TDGF1P13385 188 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 KCNE1P15382 129 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ZNF18P17022 549 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 FECHP22830 423 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 CCT6AP40227 531 aaKnown RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 EFNA5P52803 228 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PEX3P56589 373 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 OSTNP61366 133 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 FOXK2Q01167 660 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PRKCQQ04759 706 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PTGDRQ13258 359 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 TRIM14Q14142 442 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PDIA5Q14554 519 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 MLF2Q15773 248 aaPredicted RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PABPC1LQ4VXU2 614 aaKnown RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 SEZ6Q53EL9 994 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 VARS2Q5ST30 1063 aaKnown RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 RINT1Q6NUQ1 792 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PDXDC1Q6P996 788 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 MTSS1LQ765P7 747 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ERMP1Q7Z2K6 904 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 HDXQ7Z353 690 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 TMEM139Q8IV31 216 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 TCEAL8Q8IYN2 117 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 KIAA2013Q8IYS2 634 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 GOLGA6L1Q8N7Z2 621 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 MSANTD4Q8NCY6 345 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ZNF461Q8TAF7 563 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ERMNQ8TAM6 284 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 LRRC15Q8TF66 581 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 KIFAP3Q92845 792 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ERCC4Q92889 916 aaPredicted RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 CLDN23Q96B33 292 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 MCRS1Q96EZ8 462 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 ZSWIM3Q96MP5 696 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 UROC1Q96N76 676 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PNMA5Q96PV4 448 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 PYM1Q9BRP8 204 aaKnown RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 ADPGKQ9BRR6 497 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 NTPCRQ9BSD7 190 aaKnown RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 TARS2Q9BW92 718 aaKnown RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 OSBPL6Q9BZF3 934 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 FAM107BQ9H098 131 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 HSD3B7Q9H2F3 369 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 SEMA4AQ9H3S1 761 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 TMEM134Q9H6X4 195 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 LTB4R2Q9NPC1 389 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 MED4Q9NPJ6 270 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 CNTN3Q9P232 1028 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 LRWD1Q9UFC0 647 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.35□□□□□ -1.39
USP3-212ENST00000559276 POLIQ9UNA4 740 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 CLIC4Q9Y696 253 aa6.35□□□□□ -1.39
USP3-212ENST00000559276 EP300Q09472 2414 aaPredicted RBP6.35□□□□□ -1.39
USP3-212ENST00000559276 ITIH6Q6UXX5 1313 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 FAM170BA6NMN3 283 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 CCDC169A6NNP5 214 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 SFI1A8K8P3 1242 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 ARNTLO00327 626 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 PODXLO00592 558 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 SLC16A4O15374 487 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 KIF5CO60282 957 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 FAM189A1O60320 539 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 LILRB5O75023 590 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 XYLBO75191 536 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 MCF2P10911 925 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 ATF2P15336 505 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 TGM1P22735 817 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 TARSP26639 723 aaKnown RBP6.34□□□□□ -1.39
USP3-212ENST00000559276 OAS2P29728 719 aaKnown RBP6.34□□□□□ -1.39
USP3-212ENST00000559276 TRAPPC10P48553 1259 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 HNRNPH2P55795 449 aaKnown RBP6.34□□□□□ -1.39
USP3-212ENST00000559276 GNG11P61952 73 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 RAD51AP2Q09MP3 1159 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 PTPAQ15257 358 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 SAFBQ15424 915 aaKnown RBP eCLIP6.34□□□□□ -1.39
USP3-212ENST00000559276 ZBTB6Q15916 424 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 WHAMMP3Q1A5X7 153 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 ZNF528Q3MIS6 628 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 WDR44Q5JSH3 913 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 FAM78AQ5JUQ0 283 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 HAUS3Q68CZ6 603 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 TSSK4Q6SA08 328 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 LEKR1Q6ZMV7 388 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 KRBA2Q6ZNG9 492 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 RTL10Q7L3V2 364 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 MAP4K3Q8IVH8 894 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 KRI1Q8N9T8 703 aaKnown RBP6.34□□□□□ -1.39
USP3-212ENST00000559276 ZBTB44Q8NCP5 570 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 TMEM161BQ8NDZ6 487 aa6.34□□□□□ -1.39
USP3-212ENST00000559276 BEST2Q8NFU1 509 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms