RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 WEE2P0C1S8 567 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 ODC1P11926 461 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 SLC9A1P19634 815 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 OR1D2P34982 312 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 CA8P35219 290 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 PNPLA4P41247 253 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 MTIF2P46199 727 aaKnown RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 CLCN4P51793 760 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 COPB1P53618 953 aaKnown RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 ROR1Q01973 937 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 ELAVL2Q12926 359 aaKnown RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 TRPC3Q13507 836 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 PTPROQ16827 1216 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 TPD52L1Q16890 204 aaPredicted RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 CTC1Q2NKJ3 1217 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 VWA3BQ502W6 1294 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 OVOS1Q6IE37 1185 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 SLC8B1Q6J4K2 584 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 LLGL2Q6P1M3 1020 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 LILRA6Q6PI73 481 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 ADGRF2Q8IZF7 708 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 TTC9BQ8N6N2 239 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 TOP6BLQ8N6T0 577 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 WHAMMQ8TF30 809 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 PPM1EQ8WY54 764 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 BCO2Q9BYV7 579 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 VPS16Q9H269 839 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 DPEP3Q9H4B8 488 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 CRTAC1Q9NQ79 661 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 MRPL17Q9NRX2 175 aaKnown RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 RAB20Q9NX57 234 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 CLEC1BQ9P126 229 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 LIMA1Q9UHB6 759 aaKnown RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.69□□□□□ -0.54
TPM1-217ENST00000559108 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 OBSL1O75147 1896 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 COL6A3P12111 3177 aa11.69□□□□□ -0.54
TPM1-217ENST00000559108 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 PMM2O15305 246 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 TGM5O43548 720 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 TRAPPC3O43617 180 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 SEC24AO95486 1093 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 CALCAP01258 141 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 EEF1GP26641 437 aaKnown RBP11.68□□□□□ -0.54
TPM1-217ENST00000559108 ATICP31939 592 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 PSMC1P62191 440 aaKnown RBP11.68□□□□□ -0.54
TPM1-217ENST00000559108 YWHAHQ04917 246 aaPredicted RBP11.68□□□□□ -0.54
TPM1-217ENST00000559108 SGSM1Q2NKQ1 1148 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 ZNF667Q5HYK9 610 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 KIAA1841Q6NSI8 718 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 PHLDB3Q6NSJ2 640 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 PALB2Q86YC2 1186 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 GPR65Q8IYL9 337 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 RNF214Q8ND24 703 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 KREMEN1Q96MU8 473 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 RHOBTB2Q9BYZ6 727 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 INTS2Q9H0H0 1204 aaKnown RBP11.68□□□□□ -0.54
TPM1-217ENST00000559108 NDST4Q9H3R1 872 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 TLE6Q9H808 572 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 FNIP2Q9P278 1114 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 BARX2Q9UMQ3 279 aaPredicted RBP11.68□□□□□ -0.54
TPM1-217ENST00000559108 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
TPM1-217ENST00000559108 MYBPHLA2RUH7 354 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 NRG2O14511 850 aaPredicted RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 EPHB6O15197 1021 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 TEX33O43247 280 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 AP5Z1O43299 807 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 TACC1O75410 805 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 FGFR1OPO95684 399 aaKnown RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 ACO1P21399 889 aaKnown RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 WARSP23381 471 aaKnown RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 PON1P27169 355 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 NDUFV1P49821 464 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 ARPP19P56211 112 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 MYO1EQ12965 1108 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 ADAM15Q13444 863 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 RAB33AQ14088 237 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 PDE12Q6L8Q7 609 aaKnown RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 ZNF280DQ6N043 979 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 TRIM65Q6PJ69 517 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 ANKS3Q6ZW76 656 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 EFHBQ8N7U6 833 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 EHBP1Q8NDI1 1231 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 APPL2Q8NEU8 664 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 MAFAQ8NHW3 353 aaPredicted RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 TAF4BQ92750 862 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 NAP1L5Q96NT1 182 aaPredicted RBP11.67□□□□□ -0.54
TPM1-217ENST00000559108 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 ZCWPW1Q9H0M4 648 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 TSPY26PQ9H489 355 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 TMEM30AQ9NV96 361 aa11.67□□□□□ -0.54
TPM1-217ENST00000559108 DDX43Q9NXZ2 648 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms