RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 BEST2Q8NFU1 509 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 PIGOQ8TEQ8 1089 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 ADAMTS14Q8WXS8 1223 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 KIFC3Q9BVG8 833 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 SLC26A6Q9BXS9 759 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 CCDC113Q9H0I3 377 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 ZSWIM4Q9H7M6 989 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 PRMT7Q9NVM4 692 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 OBP2AQ9NY56 170 aa13.03□□□□□ -0.32
SMAD3-206ENST00000558739 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 TIMM13Q9Y5L4 95 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 MYO18AQ92614 2054 aaKnown RBP13.03□□□□□ -0.32
SMAD3-206ENST00000558739 SH3BP5O60239 455 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 DGAT1O75907 488 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 SLITRK3O94933 977 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 NLRP5P59047 1200 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 OSTNP61366 133 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 FAM187BQ17R55 369 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 MOXD1Q6UVY6 613 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 DNAJB7Q7Z6W7 309 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-206ENST00000558739 POTEDQ86YR6 584 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 SYT12Q8IV01 421 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 HDDC3Q8N4P3 179 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 SUSD3Q96L08 255 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 UBL7Q96S82 380 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-206ENST00000558739 P2RY13Q9BPV8 354 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 SLC46A2Q9BY10 475 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 IL21Q9HBE4 155 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 PCDHA4Q9UN74 947 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 DOPEY2Q9Y3R5 2298 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 MUC22E2RYF6 1773 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-206ENST00000558739 ANK1P16157 1881 aa13.02□□□□□ -0.33
SMAD3-206ENST00000558739 ANKRD17O75179 2603 aaKnown RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 DRD1P21728 446 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 NMT1P30419 496 aaKnown RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 GJA4P35212 333 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 RARRES1P49788 294 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 EPHB3P54753 998 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 SEC13P55735 322 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 TRIP6Q15654 476 aaKnown RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 SLC23A3Q6PIS1 610 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 DHX32Q7L7V1 743 aaKnown RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 SLCO6A1Q86UG4 719 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 SFTPA1Q8IWL2 248 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 MINDY1Q8N5J2 469 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 PIP4K2CQ8TBX8 421 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 DDX12PQ92771 950 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 USP13Q92995 863 aaPredicted RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 ACDQ96AP0 544 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 CNOT6LQ96LI5 555 aaKnown RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 AIFM3Q96NN9 605 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 TASP1Q9H6P5 420 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
SMAD3-206ENST00000558739 PILRBQ9UKJ0 227 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 NUB1Q9Y5A7 615 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 NID2Q14112 1375 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 TSC2P49815 1807 aa13.01□□□□□ -0.33
SMAD3-206ENST00000558739 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
SMAD3-206ENST00000558739 TNFRSF10BO14763 440 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 OPHN1O60890 802 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 MCM4P33991 863 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 RDXP35241 583 aaKnown RBP13□□□□□ -0.33
SMAD3-206ENST00000558739 RCAN1P53805 252 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 CYP4F3Q08477 520 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 C2orf27AQ580R0 203 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 ZNF605Q86T29 641 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 C11orf74Q86VG3 221 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 CCDC33Q8N5R6 958 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 DEFB119Q8N690 84 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 STKLD1Q8NE28 680 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 OLIG1Q8TAK6 271 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 PSMG2Q969U7 264 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 EIF2AK1Q9BQI3 630 aaKnown RBP13□□□□□ -0.33
SMAD3-206ENST00000558739 ADPGKQ9BRR6 497 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 CAPN10Q9HC96 672 aa13□□□□□ -0.33
SMAD3-206ENST00000558739 THG1LQ9NWX6 298 aaKnown RBP13□□□□□ -0.33
SMAD3-206ENST00000558739 A0A087WV48 116 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 MTMR11A4FU01 709 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ACKR2O00590 384 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ATXN7O15265 892 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ATF6P18850 670 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ITPKBP27987 946 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 P2RY2P41231 377 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ATXN3P54252 364 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-206ENST00000558739 PLD1Q13393 1074 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 MAPK6Q16659 721 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 DCAF4L1Q3SXM0 396 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 FBXO43Q4G163 708 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 ARHGAP15Q53QZ3 475 aa12.99□□□□□ -0.33
SMAD3-206ENST00000558739 PEAR1Q5VY43 1037 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-206ENST00000558739 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms