RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 IQCB1Q15051 598 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 SGSM1Q2NKQ1 1148 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 ZNF699Q32M78 642 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 PRSS55Q6UWB4 352 aaPredicted RBP11.16□□□□□ -0.62
PSMA4-207ENST00000558635 LRSAM1Q6UWE0 723 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 ADGRD2Q7Z7M1 963 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 DHX40Q8IX18 779 aaKnown RBP11.16□□□□□ -0.62
PSMA4-207ENST00000558635 FBXL13Q8NEE6 735 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 APPL2Q8NEU8 664 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 LNX1Q8TBB1 728 aaPredicted RBP11.16□□□□□ -0.62
PSMA4-207ENST00000558635 PIK3R5Q8WYR1 880 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 SEMA4DQ92854 862 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.16□□□□□ -0.62
PSMA4-207ENST00000558635 MRPL17Q9NRX2 175 aaKnown RBP11.16□□□□□ -0.62
PSMA4-207ENST00000558635 GDAP2Q9NXN4 497 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 SNX9Q9Y5X1 595 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 PLXNA4Q9HCM2 1894 aa11.16□□□□□ -0.62
PSMA4-207ENST00000558635 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 BECN2A8MW95 431 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 HUS1O60921 280 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 LRRN2O75325 713 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 CLSTN1O94985 981 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 CAVIN2O95810 425 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 ASS1P00966 412 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 FOSL2P15408 326 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 RPL17P18621 184 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 TYMPP19971 482 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 EEF1GP26641 437 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 MYL7Q01449 175 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 PSMD5Q16401 504 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 MAN2A1Q16706 1144 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 WDR72Q3MJ13 1102 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 TCEAL5Q5H9L2 206 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 WSCD1Q658N2 575 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 SPOPLQ6IQ16 392 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 RBM23Q86U06 439 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 GPR65Q8IYL9 337 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 TUBGCP2Q9BSJ2 902 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 PI4K2AQ9BTU6 479 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 HSD3B7Q9H2F3 369 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 TSPY26PQ9H489 355 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 NSUN3Q9H649 340 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 VRTNQ9H8Y1 702 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 RAB20Q9NX57 234 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
PSMA4-207ENST00000558635 L1RE1Q9UN81 338 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 SSX2IPQ9Y2D8 614 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 IRAK3Q9Y616 596 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
PSMA4-207ENST00000558635 ARHGEF37A1IGU5 675 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 H7C4K7 107 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 PER2O15055 1255 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 PMM2O15305 246 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 CYP11A1P05108 521 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 CNPP09543 421 aaKnown RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 ZNF18P17022 549 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 CDK11BP21127 795 aaKnown RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 NRIP1P48552 1158 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 ZNF445P59923 1031 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 TNNC1P63316 161 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 YWHAHQ04917 246 aaPredicted RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 MRPL58Q14197 206 aaKnown RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 KRT31Q15323 416 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 CCDC85BQ15834 202 aaPredicted RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 SOWAHAQ2M3V2 549 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 VWA3BQ502W6 1294 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 ZNF667Q5HYK9 610 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 OVOS1Q6IE37 1185 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 PDXDC1Q6P996 788 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 RSPO2Q6UXX9 243 aaPredicted RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 ANKS3Q6ZW76 656 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 LIMS2Q7Z4I7 341 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 LUZP1Q86V48 1076 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 METTL23Q86XA0 190 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 PDCL2Q8N4E4 241 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 TOP6BLQ8N6T0 577 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 CCDC150Q8NCX0 1101 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 TAF4BQ92750 862 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 KLHL5Q96PQ7 755 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 MMS19Q96T76 1030 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 EMILIN2Q9BXX0 1053 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 IMPG2Q9BZV3 1241 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 TLE6Q9H808 572 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 RXFP1Q9HBX9 757 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 APOBEC3GQ9HC16 384 aaKnown RBP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.14□□□□□ -0.63
PSMA4-207ENST00000558635 TAB2Q9NYJ8 693 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 FNIP2Q9P278 1114 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 DSEQ9UL01 958 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 MYO7AQ13402 2215 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 SCN1AP35498 2009 aa11.14□□□□□ -0.63
PSMA4-207ENST00000558635 PES1O00541 588 aaKnown RBP11.13□□□□□ -0.63
PSMA4-207ENST00000558635 P4HA2O15460 535 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms