RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 PDCD11Q14690 1871 aaKnown RBP16.73■□□□□ 0.27
LINC01220-201ENST00000558575 C4BPAP04003 597 aaKnown RBP16.72■□□□□ 0.27
LINC01220-201ENST00000558575 TNNI1P19237 187 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 FGFR3P22607 806 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 LILRA4P59901 499 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 DSG1Q02413 1049 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 RARS2Q5T160 578 aaKnown RBP16.72■□□□□ 0.27
LINC01220-201ENST00000558575 KIAA1841Q6NSI8 718 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 SUSD3Q96L08 255 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
LINC01220-201ENST00000558575 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 AGAP1Q9UPQ3 857 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 IRAK3Q9Y616 596 aa16.72■□□□□ 0.27
LINC01220-201ENST00000558575 SF3B1O75533 1304 aaKnown RBP eCLIP16.71■□□□□ 0.27
LINC01220-201ENST00000558575 ITGB3P05106 788 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
LINC01220-201ENST00000558575 POLR2BP30876 1174 aaKnown RBP16.71■□□□□ 0.27
LINC01220-201ENST00000558575 VAMP7P51809 220 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 PPP3CAQ08209 521 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 USP41Q3LFD5 358 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 FILIP1Q7Z7B0 1213 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 LNX1Q8TBB1 728 aaPredicted RBP16.71■□□□□ 0.27
LINC01220-201ENST00000558575 RUBCNQ92622 972 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 FNBP1Q96RU3 617 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 RXFP1Q9HBX9 757 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 DUSP12Q9UNI6 340 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 USTQ9Y2C2 406 aa16.71■□□□□ 0.27
LINC01220-201ENST00000558575 ANKRD11Q6UB99 2663 aaPredicted RBP16.71■□□□□ 0.26
LINC01220-201ENST00000558575 BICDL2A1A5D9 508 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 M0QZQ0 153 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 C2CD2LO14523 706 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 CLASP2O75122 1294 aaKnown RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 TRIM49P0CI25 452 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 TRIM49CP0CI26 452 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 GLUD2P49448 558 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 RBP5P82980 135 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 MRPL58Q14197 206 aaKnown RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 SMC1AQ14683 1233 aaKnown RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 NFKBIBQ15653 356 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 PRSS55Q6UWB4 352 aaPredicted RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 RSPO2Q6UXX9 243 aaPredicted RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 INTS8Q75QN2 995 aaKnown RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 IRF2BP1Q8IU81 584 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 GPR65Q8IYL9 337 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 PLCD3Q8N3E9 789 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 CEP63Q96MT8 703 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 KLHL5Q96PQ7 755 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 TTPALQ9BTX7 342 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 SRRTQ9BXP5 876 aaKnown RBP16.7■□□□□ 0.26
LINC01220-201ENST00000558575 ITGA11Q9UKX5 1188 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
LINC01220-201ENST00000558575 SCN1AP35498 2009 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 IKBKBO14920 756 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 SLC16A3O15427 465 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 TRAPPC3O43617 180 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 NARSO43776 548 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 VNN1O95497 513 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 TNNC2P02585 160 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 CNPP09543 421 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 ERCC5P28715 1186 aaPredicted RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 ENPEPQ07075 957 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 BFSP1Q12934 665 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 TDGQ13569 410 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 TDRD10Q5VZ19 366 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 SV2AQ7L0J3 742 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 CEP57Q86XR8 500 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 PIK3R5Q8WYR1 880 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 SENP8Q96LD8 212 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 MRPL17Q9NRX2 175 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 STK39Q9UEW8 545 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 RALYQ9UKM9 306 aaKnown RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 FBXL21Q9UKT6 434 aa16.69■□□□□ 0.26
LINC01220-201ENST00000558575 TIMM13Q9Y5L4 95 aaPredicted RBP16.69■□□□□ 0.26
LINC01220-201ENST00000558575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.68■□□□□ 0.26
LINC01220-201ENST00000558575 KRBA1A5PL33 1030 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 SYN3O14994 580 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 ADAM12O43184 909 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 TBC1D4O60343 1298 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 LRRN2O75325 713 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 URODP06132 367 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 KRT19P08727 400 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 SP9P0CG40 484 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 EPB41P11171 864 aaKnown RBP16.68■□□□□ 0.26
LINC01220-201ENST00000558575 RPL17P18621 184 aaKnown RBP16.68■□□□□ 0.26
LINC01220-201ENST00000558575 PTMSP20962 102 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 TAF6P49848 677 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 ZACNQ401N2 412 aa16.68■□□□□ 0.26
LINC01220-201ENST00000558575 C11orf57Q6ZUT1 292 aaPredicted RBP16.68■□□□□ 0.26
LINC01220-201ENST00000558575 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms