RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CDR2Q01850 454 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 BTG3Q14201 252 aaPredicted RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 TIGD5Q53EQ6 642 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 C10orf76Q5T2E6 689 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 ADGRF2Q8IZF7 708 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 CRYBG2Q8N1P7 616 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 PDCL2Q8N4E4 241 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 WHAMMQ8TF30 809 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 KBTBD7Q8WVZ9 684 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 TNIP3Q96KP6 325 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 YME1L1Q96TA2 773 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 EIF3CQ99613 913 aaKnown RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 RAD9AQ99638 391 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 AGPAT1Q99943 283 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 SYT11Q9BT88 431 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 OXCT2Q9BYC2 517 aaPredicted RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 SNX25Q9H3E2 840 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 AAASQ9NRG9 546 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 NOCTQ9UK39 431 aaKnown RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 L1RE1Q9UN81 338 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
VPS18-202ENST00000558474 ATP8B3O60423 1300 aa15.87■□□□□ 0.13
VPS18-202ENST00000558474 AKR1B10O60218 316 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 B4GALT3O60512 393 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 NDUFA10O95299 355 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 IPO7O95373 1038 aaKnown RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 PNMA6AP0CW24 399 aaPredicted RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 VDRP11473 427 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 GNA15P30679 374 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 EIF4A3P38919 411 aaKnown RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 RAP1GAPP47736 663 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 SLC11A1P49279 550 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 NDST1P52848 882 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 RAD23BP54727 409 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 BCAR1P56945 870 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 KRT83P78385 493 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 SLC18A3Q16572 532 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 TRIM72Q6ZMU5 477 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 ZNF571Q7Z3V5 609 aaPredicted RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 SLC47A2Q86VL8 602 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 HERC6Q8IVU3 1022 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 TXLNBQ8N3L3 684 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 SLC4A11Q8NBS3 891 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 OR6B3Q8NGW1 331 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 SP7Q8TDD2 431 aaPredicted RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 DDX1Q92499 740 aaKnown RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 ZNF830Q96NB3 372 aaPredicted RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 LUC7LQ9NQ29 371 aaKnown RBP15.86■□□□□ 0.13
VPS18-202ENST00000558474 KCND1Q9NSA2 647 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 STXBP5LQ9Y2K9 1186 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 ZKSCAN5Q9Y2L8 839 aa15.86■□□□□ 0.13
VPS18-202ENST00000558474 SF3B1O75533 1304 aaKnown RBP eCLIP15.86■□□□□ 0.13
VPS18-202ENST00000558474 SOWAHDA6NJG2 315 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 A8MXQ7 604 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 CCP110O43303 1012 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 PLEKP08567 350 aaPredicted RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 GZMAP12544 262 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 TNFAIP3P21580 790 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 PCSK1P29120 753 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 PPM1AP35813 382 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 KIF11P52732 1056 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 PAN2Q504Q3 1202 aaKnown RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 RAD9BQ6WBX8 426 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 NOP9Q86U38 636 aaKnown RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 THEM5Q8N1Q8 247 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 SLC30A5Q8TAD4 765 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 ZNF558Q96NG5 402 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 MRPL45Q9BRJ2 306 aaKnown RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 ZBED2Q9BTP6 218 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 MARCH5Q9NX47 278 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 CXXC1Q9P0U4 656 aaPredicted RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 CACNG4Q9UBN1 327 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 PCDHGC3Q9UN70 934 aa15.85■□□□□ 0.13
VPS18-202ENST00000558474 PRG3Q9Y2Y8 225 aaPredicted RBP15.85■□□□□ 0.13
VPS18-202ENST00000558474 OAZ2O95190 189 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 EFEMP2O95967 443 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 MAGEA10P43363 369 aaPredicted RBP15.84■□□□□ 0.13
VPS18-202ENST00000558474 BRCC3P46736 316 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 SPA17Q15506 151 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 WSCD1Q658N2 575 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 KCNT2Q6UVM3 1135 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.84■□□□□ 0.13
VPS18-202ENST00000558474 FIBCD1Q8N539 461 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 ZNF606Q8WXB4 792 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 CLP1Q92989 425 aaKnown RBP15.84■□□□□ 0.13
VPS18-202ENST00000558474 ACBD6Q9BR61 282 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 ZNF518BQ9C0D4 1074 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 ELOVL4Q9GZR5 314 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 ADAMTS1Q9UHI8 967 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 CDH9Q9ULB4 789 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 RWDD3Q9Y3V2 267 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 KIAA1671Q9BY89 1806 aa15.84■□□□□ 0.13
VPS18-202ENST00000558474 ZSCAN12O43309 604 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 THAP12O43422 761 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 LSM8O95777 96 aaKnown RBP15.83■□□□□ 0.12
VPS18-202ENST00000558474 ITGB1P05556 798 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 CCDC175P0C221 793 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 FMO1Q01740 532 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 MAPRE1Q15691 268 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms