RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 KCNH6Q9H252 994 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 SLC39A2Q9NP94 309 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 AGPAT3Q9NRZ7 376 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 HSPBP1Q9NZL4 362 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 CEP72Q9P209 647 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 SIX4Q9UIU6 781 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 LHX6Q9UPM6 363 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 AGAP1Q9UPQ3 857 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 NUMBLQ9Y6R0 609 aa9.48□□□□□ -0.89
SNRPA1-206ENST00000558059 CACNA1IQ9P0X4 2223 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 DENND4CQ5VZ89 1909 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 MTMR11A4FU01 709 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 ZNF233A6NK53 670 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 KPNA7A9QM74 516 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 CLIC2O15247 247 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 ITGB3P05106 788 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 AVPR2P30518 371 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 PLA2G5P39877 138 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 CCR2P41597 374 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 TWF1Q12792 350 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 CENPPQ6IPU0 288 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 LRRTM3Q86VH5 581 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 SUGP1Q8IWZ8 645 aaKnown RBP9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 NELFCDQ8IXH7 590 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 HS6ST3Q8IZP7 471 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 ATAD1Q8NBU5 361 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 OR5B17Q8NGF7 314 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 NOC3LQ8WTT2 800 aaKnown RBP9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 ING5Q8WYH8 240 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 FGF14Q92915 247 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 TCEAL4Q96EI5 215 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 PGLYRP2Q96PD5 576 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 CORO1BQ9BR76 489 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 SCAND2PQ9GZW5 306 aaPredicted RBP9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 ZCWPW1Q9H0M4 648 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 INTS13Q9NVM9 706 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 USP25Q9UHP3 1055 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 DSEQ9UL01 958 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 MRPS23Q9Y3D9 190 aaKnown RBP9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 YIPF1Q9Y548 306 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 ATP6V1DQ9Y5K8 247 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 UBE4BO95155 1302 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 PTPRJQ12913 1337 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 VPS13AQ96RL7 3174 aa9.47□□□□□ -0.89
SNRPA1-206ENST00000558059 A0A1W2PQ27 194 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 A0A1W2PQ64 194 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 A0A1W2PQD8 194 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 MOSPD3O75425 235 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 MICAL2O94851 1124 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 SRFP11831 508 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 NPR3P17342 541 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 CEBPBP17676 345 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 PNPLA4P41247 253 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 SYKP43405 635 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 NDUFA8P51970 172 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 EPHA5P54756 1037 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 SNRPFP62306 86 aaKnown RBP9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 RBP5P82980 135 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 STK4Q13043 487 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 BECN1Q14457 450 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 SURF1Q15526 300 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 KNOP1Q1ED39 458 aaKnown RBP9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 SV2CQ496J9 727 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 SLC39A12Q504Y0 691 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 LMBRD2Q68DH5 695 aaPredicted RBP9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 MTSS1LQ765P7 747 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 METTL23Q86XA0 190 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 C12orf56Q8IXR9 622 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 CSGALNACT2Q8N6G5 542 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 TTC9BQ8N6N2 239 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 KIAA0895Q8NCT3 520 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 PRSS33Q8NF86 280 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 FAM122AQ96E09 287 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 MCRS1Q96EZ8 462 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF512Q96ME7 567 aaPredicted RBP9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF560Q96MR9 790 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 LRRC3Q9BY71 257 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 MTMR12Q9C0I1 747 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 GZF1Q9H116 711 aaPredicted RBP9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 GDPD2Q9HCC8 539 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 KIAA1586Q9HCI6 787 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 GDAP2Q9NXN4 497 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 GDE1Q9NZC3 331 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 WNT16Q9UBV4 365 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 ITGA11Q9UKX5 1188 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 WDR87Q6ZQQ6 2873 aa9.46□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF638Q14966 1978 aaKnown RBP9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 KRBA1A5PL33 1030 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF197O14709 1029 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 SOAT2O75908 522 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CFHP08603 1231 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 TMEM191BP0C7N4 346 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms