RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 AGPAT1Q99943 283 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 MRPL45Q9BRJ2 306 aaKnown RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 ZBED2Q9BTP6 218 aa17.99■□□□□ 0.47
SNX1-203ENST00000558040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNX1-203ENST00000558040 RC3H2Q9HBD1 1191 aaKnown RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 PUF60Q9UHX1 559 aaKnown RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 EPN1Q9Y6I3 576 aaPredicted RBP17.99■□□□□ 0.47
SNX1-203ENST00000558040 A8MXQ7 604 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 EIF3CLB5ME19 914 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 M0QZQ0 153 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 NDUFA10O95299 355 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 GJB5O95377 273 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 GALTP07902 379 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 TNFAIP3P21580 790 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 GNL1P36915 607 aaPredicted RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 LHX1P48742 406 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 SLC11A1P49279 550 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 RAD23BP54727 409 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 BCAR1P56945 870 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 CDR2Q01850 454 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 ELAVL2Q12926 359 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 SPA17Q15506 151 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 ZNF394Q53GI3 561 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 SPOUT1Q5T280 376 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 WSCD1Q658N2 575 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 NOP9Q86U38 636 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 HASPINQ8TF76 798 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 KBTBD7Q8WVZ9 684 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 EIF3CQ99613 913 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 LUC7LQ9NQ29 371 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 NOCTQ9UK39 431 aaKnown RBP17.98■□□□□ 0.47
SNX1-203ENST00000558040 ADAM28Q9UKQ2 775 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 KIAA1257Q9ULG3 409 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 PCDHB8Q9UN66 801 aa17.98■□□□□ 0.47
SNX1-203ENST00000558040 SF3B1O75533 1304 aaKnown RBP eCLIP17.98■□□□□ 0.474e-7■■■■■ 86.2
SNX1-203ENST00000558040 THAP12O43422 761 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 MED7O43513 233 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 CYP11A1P05108 521 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 LAG3P18627 525 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 TYMPP19971 482 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 BRCC3P46736 316 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 KRT83P78385 493 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 MTF1Q14872 753 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 SLC18A3Q16572 532 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 ASTE1Q2TB18 679 aaPredicted RBP17.97■□□□□ 0.47
SNX1-203ENST00000558040 CD300LGQ6UXG3 332 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 TMCO2Q7Z6W1 182 aaPredicted RBP17.97■□□□□ 0.47
SNX1-203ENST00000558040 SLC4A11Q8NBS3 891 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 WHAMMQ8TF30 809 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 TNIP3Q96KP6 325 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 ELOVL4Q9GZR5 314 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 PDCL3Q9H2J4 239 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 CWH43Q9H720 699 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 SEPT11Q9NVA2 429 aaKnown RBP17.97■□□□□ 0.47
SNX1-203ENST00000558040 CXXC1Q9P0U4 656 aaPredicted RBP17.97■□□□□ 0.47
SNX1-203ENST00000558040 PYCARDQ9ULZ3 195 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 INSL6Q9Y581 213 aa17.97■□□□□ 0.47
SNX1-203ENST00000558040 COL4A6Q14031 1691 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 GABRDO14764 452 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 SYN3O14994 580 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 CCP110O43303 1012 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 ITGB1P05556 798 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 CCDC175P0C221 793 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 VDRP11473 427 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 CD19P15391 556 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 ATP2A2P16615 1042 aaKnown RBP17.96■□□□□ 0.47
SNX1-203ENST00000558040 HTRA4P83105 476 aaPredicted RBP17.96■□□□□ 0.47
SNX1-203ENST00000558040 TAF3Q5VWG9 929 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 TRIM72Q6ZMU5 477 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 ZSCAN30Q86W11 494 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 HERC6Q8IVU3 1022 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 TXLNBQ8N3L3 684 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 SLC20A1Q8WUM9 679 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 HEXIM2Q96MH2 286 aaKnown RBP17.96■□□□□ 0.47
SNX1-203ENST00000558040 ZNF558Q96NG5 402 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 SYT11Q9BT88 431 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 SPTLC3Q9NUV7 552 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 HCSTQ9UBK5 93 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 HMGXB4Q9UGU5 601 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 ADAMTS1Q9UHI8 967 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 STXBP5LQ9Y2K9 1186 aa17.96■□□□□ 0.47
SNX1-203ENST00000558040 F8W810 466 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 I3L4J1 428 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 LCA5LO95447 670 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 MMEP08473 750 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 IGFBP6P24592 240 aaPredicted RBP17.95■□□□□ 0.46
SNX1-203ENST00000558040 PCSK1P29120 753 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 MAGEA10P43363 369 aaPredicted RBP17.95■□□□□ 0.46
SNX1-203ENST00000558040 GFPT1Q06210 699 aaPredicted RBP17.95■□□□□ 0.46
SNX1-203ENST00000558040 STILQ15468 1287 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 SGO2Q562F6 1265 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 C10orf76Q5T2E6 689 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 FUT10Q6P4F1 479 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 TOGARAM2Q6ZUX3 1019 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 GLYCTKQ8IVS8 523 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 THEM5Q8N1Q8 247 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 FIBCD1Q8N539 461 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 ZNF606Q8WXB4 792 aa17.95■□□□□ 0.46
SNX1-203ENST00000558040 DDX1Q92499 740 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms