RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 GRIK2Q13002 908 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 MRPL58Q14197 206 aaKnown RBP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 EMC2Q15006 297 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 PCBP1Q15365 356 aaKnown RBP eCLIP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SMAD1Q15797 465 aaKnown RBP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 ARHGAP15Q53QZ3 475 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SPDYCQ5MJ68 293 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 DHRS13Q6UX07 377 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 NOSTRINQ8IVI9 506 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SLC41A1Q8IVJ1 513 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SFTPA1Q8IWL2 248 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SPACA3Q8IXA5 215 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 MB21D2Q8IYB1 491 aaPredicted RBP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 TTC9BQ8N6N2 239 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 EXOC6Q8TAG9 804 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 NXPE2Q96DL1 559 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 WBP1Q96G27 269 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SLC46A2Q9BY10 475 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 TASP1Q9H6P5 420 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 BCCIPQ9P287 314 aaKnown RBP eCLIP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 WRAP73Q9P2S5 460 aaPredicted RBP10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 GDAQ9Y2T3 454 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 PAXBP1Q9Y5B6 917 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 AK5Q9Y6K8 562 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 RELNP78509 3460 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 C2CD3Q4AC94 2353 aa10.6□□□□□ -0.71
IGKV2D-28-202ENST00000558026 CCDC69A6NI79 296 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 H7C4K7 107 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 K7EQS6 105 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 ASAP2O43150 1006 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 AP5Z1O43299 807 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 ALDH1A2O94788 518 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 OR4Q2P0C623 313 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 CCR10P46092 362 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 EPHB3P54753 998 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 PSMC5P62195 406 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 RHDQ02161 417 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 DUSP4Q13115 394 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 CAPSQ13938 189 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 C4orf17Q53FE4 359 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 B3GNT9Q6UX72 402 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 DNAJB7Q7Z6W7 309 aaPredicted RBP10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 TEX2Q8IWB9 1127 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 PGBD3Q8N328 593 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 FANCBQ8NB91 859 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 RDM1Q8NG50 284 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 ASAP3Q8TDY4 903 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 BAP1Q92560 729 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 USP13Q92995 863 aaPredicted RBP10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 PPP1R10Q96QC0 940 aaKnown RBP10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 ECT2Q9H8V3 914 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 CPNE5Q9HCH3 593 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 ZDHHC4Q9NPG8 344 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 XPNPEP1Q9NQW7 623 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 BARHL2Q9NY43 387 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 BTBD3Q9Y2F9 522 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 USP20Q9Y2K6 914 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 SLC27A5Q9Y2P5 690 aa10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 V9GY48 417 aaPredicted RBP10.59□□□□□ -0.71
IGKV2D-28-202ENST00000558026 MYLKQ15746 1914 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 LRRK2Q5S007 2527 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ENO4A6NNW6 628 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 E9PAM4 449 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 SGK1O00141 431 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ZBTB39O15060 712 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 RFC5P40937 340 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CDR1P51861 262 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 KCNH2Q12809 1159 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ARHGAP40Q5TG30 622 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 RABEPKQ7Z6M1 372 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 MICU3Q86XE3 530 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CMTM8Q8IZV2 173 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 ALLCQ8N6M5 410 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 SNIP1Q8TAD8 396 aaKnown RBP10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 RHBDD1Q8TEB9 315 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TCP11Q8WWU5 503 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 TTC9Q92623 222 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 HSPA12BQ96MM6 686 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 PI4K2AQ9BTU6 479 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 U3KPZ7 1027 aaPredicted RBP10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 KNL1Q8NG31 2342 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 DENND4CQ5VZ89 1909 aa10.58□□□□□ -0.72
IGKV2D-28-202ENST00000558026 MYO18AQ92614 2054 aaKnown RBP10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 UTP20O75691 2785 aaKnown RBP10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 NBPF19A0A087WUL8 3843 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 A0A1W2PQD8 194 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 EML1O00423 815 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 SH2B2O14492 632 aaPredicted RBP10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 SYN3O14994 580 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 PRC1O43663 620 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 KLF8O95600 359 aaPredicted RBP10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 MAOBP27338 520 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 WEE1P30291 646 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 CYP4A11Q02928 519 aa10.57□□□□□ -0.72
IGKV2D-28-202ENST00000558026 PTH1RQ03431 593 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms