RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 OR5B17Q8NGF7 314 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 SMG7Q92540 1137 aaKnown RBP13.45□□□□□ -0.26
SLIRP-211ENST00000557623 BORCS6Q96GS4 357 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 TSG101Q99816 390 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 PRKD2Q9BZL6 878 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 POMKQ9H5K3 350 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 PIDD1Q9HB75 910 aa13.45□□□□□ -0.26
SLIRP-211ENST00000557623 PTPRJQ12913 1337 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 HUS1O60921 280 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 XYLBO75191 536 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 POU2F2P09086 479 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 WEE2P0C1S8 567 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 ADAM9Q13443 819 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 SMYD4Q8IYR2 804 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-211ENST00000557623 TMEM86AQ8N2M4 240 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 CXorf38Q8TB03 319 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 SLC7A14Q8TBB6 771 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 SPATA18Q8TC71 538 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-211ENST00000557623 HPDLQ96IR7 371 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 AFF4Q9UHB7 1163 aaKnown RBP13.44□□□□□ -0.26
SLIRP-211ENST00000557623 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 MAN1B1Q9UKM7 699 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
SLIRP-211ENST00000557623 LOC730098B7Z3J9 87 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 PRRG1O14668 218 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 PSMA7O14818 248 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 CETN3O15182 167 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 PHACTR2O75167 634 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 LRG1P02750 347 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 KRT13P13646 458 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 PSMC2P35998 433 aaKnown RBP13.43□□□□□ -0.26
SLIRP-211ENST00000557623 CASP4P49662 377 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 CLDN10P78369 228 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 ENPEPQ07075 957 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 GPR17Q13304 367 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 TRPC3Q13507 836 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 ZCWPW2Q504Y3 356 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 WSCD1Q658N2 575 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 CENPPQ6IPU0 288 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 INTS8Q75QN2 995 aaKnown RBP13.43□□□□□ -0.26
SLIRP-211ENST00000557623 DPH6Q7L8W6 267 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 TCEAL8Q8IYN2 117 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 ADSSL1Q8N142 457 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 TOP6BLQ8N6T0 577 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 ZNF707Q96C28 371 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-211ENST00000557623 DHTKD1Q96HY7 919 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-211ENST00000557623 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 MKNK1Q9BUB5 465 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 CYP4F11Q9HBI6 524 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 WDR6Q9NNW5 1121 aaKnown RBP13.43□□□□□ -0.26
SLIRP-211ENST00000557623 CDH22Q9UJ99 828 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
SLIRP-211ENST00000557623 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-211ENST00000557623 IKBKBO14920 756 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 ATICP31939 592 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 VAMP7P51809 220 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 MYL7Q01449 175 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 LRRC63Q05C16 580 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 ADCY1Q08828 1119 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 SMARCB1Q12824 385 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 BIRC3Q13489 604 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 RNF19BQ6ZMZ0 732 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 OTOP3Q7RTS5 596 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 FAM186BQ8IYM0 893 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 TRIML1Q8N9V2 468 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 TDRD5Q8NAT2 981 aaKnown RBP13.42□□□□□ -0.26
SLIRP-211ENST00000557623 ZNF516Q92618 1163 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 ZDHHC16Q969W1 377 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-211ENST00000557623 ACSF2Q96CM8 615 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-211ENST00000557623 FAM84AQ96KN4 292 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 GZF1Q9H116 711 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-211ENST00000557623 CD320Q9NPF0 282 aa13.42□□□□□ -0.26
SLIRP-211ENST00000557623 CLUHO75153 1309 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 GOLGA6L22H0YM25 854 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 CCL16O15467 120 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 AKAP3O75969 853 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 C4BPAP04003 597 aaKnown RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 FAM163BP0C2L3 166 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 EPB41P11171 864 aaKnown RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 LHX1P48742 406 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 FKBP3Q00688 224 aaKnown RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 TSPY1Q01534 308 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 PLD1Q13393 1074 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 MORC3Q14149 939 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 ISM2Q6H9L7 571 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 DCP1BQ8IZD4 617 aaKnown RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 ELMOD1Q8N336 334 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 PDCL2Q8N4E4 241 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 PLEKHO2Q8TD55 490 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 C2orf15Q8WU43 125 aaKnown RBP13.41□□□□□ -0.26
SLIRP-211ENST00000557623 ZCWPW1Q9H0M4 648 aa13.41□□□□□ -0.26
SLIRP-211ENST00000557623 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms