RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 ADGRE3Q9BY15 652 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 AFF4Q9UHB7 1163 aaKnown RBP8.75□□□□□ -1.01
CHD8-213ENST00000557364 ZBTB12Q9Y330 459 aaPredicted RBP8.75□□□□□ -1.01
CHD8-213ENST00000557364 TECPR2O15040 1411 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 CACNA1FO60840 1977 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 ANGPT2O15123 496 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 TOMM70O94826 608 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 CKMP06732 381 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 ATXN3P54252 364 aaPredicted RBP8.75□□□□□ -1.01
CHD8-213ENST00000557364 CENPPQ6IPU0 288 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 ACRBPQ8NEB7 543 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 RNF25Q96BH1 459 aaPredicted RBP8.75□□□□□ -1.01
CHD8-213ENST00000557364 XAB2Q9HCS7 855 aaKnown RBP8.75□□□□□ -1.01
CHD8-213ENST00000557364 CAPN11Q9UMQ6 739 aa8.75□□□□□ -1.01
CHD8-213ENST00000557364 KIDINS220Q9ULH0 1771 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ZNF609O15014 1411 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ZNF839A8K0R7 811 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PHF20L1A8MW92 1017 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 B3GAT3O94766 335 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 RPN2P04844 631 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 CYP11B2P19099 503 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 SESN3P58005 492 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ZKSCAN8Q15776 578 aaPredicted RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 PCNX4Q63HM2 1172 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 SETD3Q86TU7 594 aaPredicted RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 RIBC1Q8N443 379 aaPredicted RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 PCYOX1LQ8NBM8 494 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PHF21AQ96BD5 680 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.74□□□□□ -1.011e-6■□□□□ 10.4
CHD8-213ENST00000557364 NCKAP1Q9Y2A7 1128 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 KRT8P05787 483 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 GUCA1AP43080 201 aaPredicted RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 VCPP55072 806 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 DDIASQ8IXT1 998 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 HES6Q96HZ4 224 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 AP1M1Q9BXS5 423 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 DCLK3Q9C098 648 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ZNF556Q9HAH1 456 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PRDM16Q9HAZ2 1276 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PDE11AQ9HCR9 933 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 TLR8Q9NR97 1041 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 PPARGC1AQ9UBK2 798 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 A0A087WZ62 844 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 CFLARO15519 480 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 NCAM1P13591 858 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 RASA1P20936 1047 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 CXCR5P32302 372 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PDIA2Q13087 525 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 INPP5AQ14642 412 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ZC3H12BQ5HYM0 836 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 MRNIPQ6NTE8 343 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 METTL7BQ6UX53 244 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ATG4CQ96DT6 458 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 MRPL48Q96GC5 212 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 WDR41Q9HAD4 459 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 VPS51Q9UID3 782 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 CRLS1Q9UJA2 301 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 RSPH10B2B2RC85 870 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PARNO95453 639 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 SYF2O95926 243 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 GSNP06396 782 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 RSPH10BP0C881 870 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 MAPK1P28482 360 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 EEF1DP29692 281 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 RANBP1P43487 201 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 NOGQ13253 232 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 MAF1Q9H063 256 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 TMEM39AQ9NV64 488 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 SCOCQ9UIL1 159 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 TBX20Q9UMR3 447 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 LZTS3O60299 673 aaPredicted RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 CAPZA2P47755 286 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ARSEP51690 589 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 DPYDQ12882 1025 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ITGA9Q13797 1035 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PDK2Q15119 407 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 NBPF9Q3BBW0 867 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 PABPC1LQ4VXU2 614 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 TRMT10CQ7L0Y3 403 aaKnown RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 AIFM3Q96NN9 605 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 FTHL17Q9BXU8 183 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 WWP1Q9H0M0 922 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 TNS2Q63HR2 1409 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 M0R3G1 203 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 GYG2O15488 501 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 KRT4P19013 534 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 MYBPC2Q14324 1141 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 CSGALNACT1Q8TDX6 532 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 REEP2Q9BRK0 252 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 TAF1DQ9H5J8 278 aaPredicted RBP8.74□□□□□ -1.01
CHD8-213ENST00000557364 ITGA11Q9UKX5 1188 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 ITIH6Q6UXX5 1313 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
CHD8-213ENST00000557364 CKBP12277 381 aa8.73□□□□□ -1.01
CHD8-213ENST00000557364 PMS2P54278 862 aa8.73□□□□□ -1.01
CHD8-213ENST00000557364 ERAP2Q6P179 960 aa8.73□□□□□ -1.01
CHD8-213ENST00000557364 MPZL3Q6UWV2 235 aa8.73□□□□□ -1.01
CHD8-213ENST00000557364 CCDC149Q6ZUS6 474 aa8.73□□□□□ -1.01
CHD8-213ENST00000557364 NIPA1Q7RTP0 329 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms