RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 A0A0B4J269 797 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 WIPF3A6NGB9 483 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 F5H697 171 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 GNAI3P08754 354 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 SMARCA1P28370 1054 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 NDUFV1P49821 464 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 GNAI1P63096 354 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 TUBB3Q13509 450 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 HABP2Q14520 560 aaPredicted RBP5.53□□□□□ -1.52
VRK1-207ENST00000557352 C3orf20Q8ND61 904 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 ANKS1AQ92625 1134 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 NAF1Q96HR8 494 aaKnown RBP5.53□□□□□ -1.52
VRK1-207ENST00000557352 SMOC2Q9H3U7 446 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 GPR35Q9HC97 309 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 KMT5AQ9NQR1 393 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 MRPS18AQ9NVS2 196 aaKnown RBP5.53□□□□□ -1.52
VRK1-207ENST00000557352 CFAP97Q9P2B7 532 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 POLHQ9Y253 713 aa5.53□□□□□ -1.52
VRK1-207ENST00000557352 TRIAP1O43715 76 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 IGSF3O75054 1194 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 CHEK2O96017 543 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 RHOP08100 348 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 CCND1P24385 295 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 PRDX5P30044 214 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 ABCG1P45844 678 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 ZNF135P52742 658 aaPredicted RBP5.52□□□□□ -1.53
VRK1-207ENST00000557352 SRSF4Q08170 494 aaKnown RBP5.52□□□□□ -1.53
VRK1-207ENST00000557352 TAF2Q6P1X5 1199 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 PTF1AQ7RTS3 328 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 AMIGO2Q86SJ2 522 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 FAM90A1Q86YD7 464 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 MIER2Q8N344 545 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 PSD4Q8NDX1 1056 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 PBKQ96KB5 322 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 HAPLN3Q96S86 360 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 OSBPL9Q96SU4 736 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 C1orf43Q9BWL3 253 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 AMBRA1Q9C0C7 1298 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 WDR26Q9H7D7 661 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 SLAMF7Q9NQ25 335 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 ADAM21Q9UKJ8 722 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 AGAP1Q9UPQ3 857 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 PCDHA3Q9Y5H8 950 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.52□□□□□ -1.53
VRK1-207ENST00000557352 NR2E3Q9Y5X4 410 aa5.52□□□□□ -1.53
VRK1-207ENST00000557352 DNAJC9-AS1A6NH13 148 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 MANSC4A6NHS7 340 aaPredicted RBP5.51□□□□□ -1.53
VRK1-207ENST00000557352 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
VRK1-207ENST00000557352 FTH1P19P0C7X4 201 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 PHKA1P46020 1223 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 PIK3CGP48736 1102 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 KIF22Q14807 665 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 PAPD7Q5XG87 772 aaKnown RBP5.51□□□□□ -1.53
VRK1-207ENST00000557352 RASAL3Q86YV0 1011 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 HASPINQ8TF76 798 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 DPF1Q92782 380 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 RFKQ969G6 155 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 CNPPD1Q9BV87 410 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 TPSD1Q9BZJ3 242 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 WNT6Q9Y6F9 365 aa5.51□□□□□ -1.53
VRK1-207ENST00000557352 AOX1Q06278 1338 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 GCOM1H8Y6P7 765 aaPredicted RBP5.5□□□□□ -1.53
VRK1-207ENST00000557352 KIF20AO95235 890 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 ARIH2O95376 493 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 TTLL1O95922 423 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 NR2F6P10588 404 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 RARBP10826 455 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 PDCP20941 246 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
VRK1-207ENST00000557352 TCF15Q12870 199 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 FCRLBQ6BAA4 426 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 SMAD5Q99717 465 aaKnown RBP5.5□□□□□ -1.53
VRK1-207ENST00000557352 ALG8Q9BVK2 526 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 ACTRT3Q9BYD9 372 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 ASPSCR1Q9BZE9 553 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 SPEF1Q9Y4P9 236 aa5.5□□□□□ -1.53
VRK1-207ENST00000557352 VPS4BO75351 444 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 SOAT2O75908 522 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 CHRM3P20309 590 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 RECQLP46063 649 aaPredicted RBP5.49□□□□□ -1.53
VRK1-207ENST00000557352 TOB1P50616 345 aaPredicted RBP5.49□□□□□ -1.53
VRK1-207ENST00000557352 NOGQ13253 232 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 RBM20Q5T481 1227 aaKnown RBP5.49□□□□□ -1.53
VRK1-207ENST00000557352 THEMIS2Q5TEJ8 643 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 HEATR3Q7Z4Q2 680 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 PPP1R32Q7Z5V6 425 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 PRR18Q8N4B5 295 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 FKBP10Q96AY3 582 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 TINAGL1Q9GZM7 467 aaPredicted RBP5.49□□□□□ -1.53
VRK1-207ENST00000557352 EHD3Q9NZN3 535 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 DKK3Q9UBP4 350 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 ABCF2Q9UG63 623 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 ZDHHC8Q9ULC8 765 aa5.49□□□□□ -1.53
VRK1-207ENST00000557352 SLC16A6O15403 523 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 PRKCGP05129 697 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 ITGALP20701 1170 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 HK3P52790 923 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 USP45Q70EL2 814 aa5.48□□□□□ -1.53
VRK1-207ENST00000557352 USP37Q86T82 979 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms