RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 EHHADHQ08426 723 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 GPR17Q13304 367 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 KMT5BQ4FZB7 885 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 CYP4A22Q5TCH4 519 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 MTSS1LQ765P7 747 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 PRSS33Q8NF86 280 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 GPR152Q8TDT2 470 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 CCDC127Q96BQ5 260 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 RTP3Q9BQQ7 232 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.44
VSX1-207ENST00000557285 ASAH2Q9NR71 780 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 ITGA11Q9UKX5 1188 aa17.83■□□□□ 0.44
VSX1-207ENST00000557285 KLRC4O43908 158 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 ALDH1A3P47895 512 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 EPHB3P54753 998 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 RBP5P82980 135 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 SNRNP35Q16560 246 aaKnown RBP17.82■□□□□ 0.44
VSX1-207ENST00000557285 MGAT5BQ3V5L5 792 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 PRSS36Q5K4E3 855 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 CENPPQ6IPU0 288 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 TMEM105Q8N8V8 129 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 FAM200AQ8TCP9 573 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 BORCS6Q96GS4 357 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 ZCWPW1Q9H0M4 648 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 INTS13Q9NVM9 706 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 ABI2Q9NYB9 513 aaPredicted RBP17.82■□□□□ 0.44
VSX1-207ENST00000557285 SIX4Q9UIU6 781 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 MAFFQ9ULX9 164 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 HPSEQ9Y251 543 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 SNX9Q9Y5X1 595 aa17.82■□□□□ 0.44
VSX1-207ENST00000557285 KRBA1A5PL33 1030 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 ZNF197O14709 1029 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 HUS1O60921 280 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 PRR29P0C7W0 189 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 ACAT1P24752 427 aaKnown RBP17.81■□□□□ 0.44
VSX1-207ENST00000557285 GPC5P78333 572 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 STK4Q13043 487 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 PLD1Q13393 1074 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 KNOP1Q1ED39 458 aaKnown RBP17.81■□□□□ 0.44
VSX1-207ENST00000557285 ASTLQ6HA08 431 aaPredicted RBP17.81■□□□□ 0.44
VSX1-207ENST00000557285 POTEHQ6S545 545 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 PDCL2Q8N4E4 241 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 XXYLT1Q8NBI6 393 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 FNBP1Q96RU3 617 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 GOLPH3LQ9H4A5 285 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 SLITRK6Q9H5Y7 841 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 KIAA1586Q9HCI6 787 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 USP25Q9UHP3 1055 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 L1RE1Q9UN81 338 aa17.81■□□□□ 0.44
VSX1-207ENST00000557285 ARIH1Q9Y4X5 557 aaPredicted RBP17.81■□□□□ 0.44
VSX1-207ENST00000557285 CLSTN1O94985 981 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 RPN1P04843 607 aaKnown RBP17.8■□□□□ 0.44
VSX1-207ENST00000557285 TNNI1P19237 187 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 CYP24A1Q07973 514 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 SURF1Q15526 300 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 TEAD2Q15562 447 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 DUOXA2Q1HG44 320 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 BMT2Q1RMZ1 405 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 CWF19L1Q69YN2 538 aaKnown RBP17.8■□□□□ 0.44
VSX1-207ENST00000557285 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 LRRC52Q8N7C0 313 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 KIAA0895Q8NCT3 520 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 CXorf38Q8TB03 319 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 HPDLQ96IR7 371 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 ZSWIM3Q96MP5 696 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 LPIN3Q9BQK8 851 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 DNAJC25Q9H1X3 360 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 GDE1Q9NZC3 331 aa17.8■□□□□ 0.44
VSX1-207ENST00000557285 A0A1W2PRU2 124 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 HCRTO43612 131 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 EXOC3O60645 756 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 NPR3P17342 541 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 TSPY1Q01534 308 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 NHLH1Q02575 133 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 MYO1EQ12965 1108 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 GRM2Q14416 872 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 FAM78AQ5JUQ0 283 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 TANGO2Q6ICL3 276 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 GPIHBP1Q8IV16 184 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 WDR49Q8IV35 697 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 ADGRF2Q8IZF7 708 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 GIPC2Q8TF65 315 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 CGRRF1Q99675 332 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 PLA2G2FQ9BZM2 168 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 AVENQ9NQS1 362 aaPredicted RBP17.79■□□□□ 0.44
VSX1-207ENST00000557285 ARHGEF3Q9NR81 526 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 TMLHEQ9NVH6 421 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 DDX43Q9NXZ2 648 aaKnown RBP17.79■□□□□ 0.44
VSX1-207ENST00000557285 WNT16Q9UBV4 365 aa17.79■□□□□ 0.44
VSX1-207ENST00000557285 COL4A3Q01955 1670 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 PI15O43692 258 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 MOSPD3O75425 235 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 CASP4P49662 377 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 SNW1Q13573 536 aaKnown RBP17.78■□□□□ 0.44
VSX1-207ENST00000557285 PSMD6Q15008 389 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 OSTM1Q86WC4 334 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 DCP1BQ8IZD4 617 aaKnown RBP17.78■□□□□ 0.44
VSX1-207ENST00000557285 STKLD1Q8NE28 680 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 SHKBP1Q8TBC3 707 aa17.78■□□□□ 0.44
VSX1-207ENST00000557285 PI4K2AQ9BTU6 479 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms