RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 LY6KQ17RY6 165 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 C9orf131Q5VYM1 1079 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 DNAJC24Q6P3W2 148 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 C9orf72Q96LT7 481 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 SLC40A1Q9NP59 571 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 SAMD15Q9P1V8 674 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 PPP2R3BQ9Y5P8 575 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 ATP2C2O75185 946 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 USP2O75604 605 aaPredicted RBP23.9■■□□□ 1.42
RCCD1-208ENST00000557266 DDNO94850 711 aaPredicted RBP23.9■■□□□ 1.42
RCCD1-208ENST00000557266 ATF7P17544 494 aaPredicted RBP23.9■■□□□ 1.42
RCCD1-208ENST00000557266 CETN2P41208 172 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 LAMTOR4Q0VGL1 99 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 VGLL4Q14135 290 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 LRRC38Q5VT99 294 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 TXNRD3NBQ6F5E7 133 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 METTL7BQ6UX53 244 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 EEPD1Q7L9B9 569 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 ZCCHC9Q8N567 271 aaKnown RBP23.9■■□□□ 1.42
RCCD1-208ENST00000557266 WDTC1Q8N5D0 677 aa23.9■■□□□ 1.42
RCCD1-208ENST00000557266 OGTO15294 1046 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 SRGAP2CP0DJJ0 459 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 MARK3P27448 753 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 MCL1Q07820 350 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 MPP2Q14168 576 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 DUOXA2Q1HG44 320 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 PPP1R15BQ5SWA1 713 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 GPAT2Q6NUI2 795 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 TMEM35BQ8NCS4 154 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 CNKSR2Q8WXI2 1034 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 TFAP2BQ92481 460 aa23.89■■□□□ 1.42
RCCD1-208ENST00000557266 CPSF3Q9UKF6 684 aaKnown RBP23.89■■□□□ 1.42
RCCD1-208ENST00000557266 PRKCBP05771 671 aa23.89■■□□□ 1.41
RCCD1-208ENST00000557266 LMNB2Q03252 620 aa23.89■■□□□ 1.41
RCCD1-208ENST00000557266 ZFYVE27Q5T4F4 411 aa23.89■■□□□ 1.41
RCCD1-208ENST00000557266 IER5Q5VY09 327 aa23.89■■□□□ 1.41
RCCD1-208ENST00000557266 DRICH1Q6PGQ1 229 aaPredicted RBP23.89■■□□□ 1.41
RCCD1-208ENST00000557266 SPOCD1Q6ZMY3 1216 aa23.89■■□□□ 1.41
RCCD1-208ENST00000557266 TRIM50Q86XT4 487 aa23.89■■□□□ 1.41
RCCD1-208ENST00000557266 RBM15Q96T37 977 aaKnown RBP eCLIP23.89■■□□□ 1.417e-9■■■■□ 24.7
RCCD1-208ENST00000557266 NSRP1Q9H0G5 558 aaKnown RBP23.89■■□□□ 1.41
RCCD1-208ENST00000557266 ZBTB42B2RXF5 422 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 TJP3O95049 919 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 WEE2P0C1S8 567 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 ZSCAN5DPP0CG00 497 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 SGSM1Q2NKQ1 1148 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 EAPPQ56P03 285 aaPredicted RBP23.88■■□□□ 1.41
RCCD1-208ENST00000557266 DCUN1D2Q6PH85 259 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 SCARA5Q6ZMJ2 495 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 LRRC71Q8N4P6 559 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 RNF149Q8NC42 400 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 DYDC1Q8WWB3 177 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 ACSF2Q96CM8 615 aaPredicted RBP23.88■■□□□ 1.41
RCCD1-208ENST00000557266 SPATC1LQ9H0A9 340 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 A0A0G2JMZ2 1700 aa23.88■■□□□ 1.41
RCCD1-208ENST00000557266 ARIH2O95376 493 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 HOXC6P09630 235 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 TGFB3P10600 412 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 NCAPG2Q86XI2 1143 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 ALLCQ8N6M5 410 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 ANKRD42Q8N9B4 389 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 FAM167AQ96KS9 214 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 ZNF518BQ9C0D4 1074 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 R3HDMLQ9H3Y0 253 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 MLXIPLQ9NP71 852 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 KCNK9Q9NPC2 374 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 EURLQ9NYK6 297 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 TBK1Q9UHD2 729 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 NAALADL1Q9UQQ1 740 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 TCP11X1B4DZS4 312 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 DNALI1O14645 258 aaPredicted RBP23.87■■□□□ 1.41
RCCD1-208ENST00000557266 CDH16O75309 829 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 OAS1P00973 400 aaKnown RBP23.87■■□□□ 1.41
RCCD1-208ENST00000557266 BRAFP15056 766 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 CDH5P33151 784 aaPredicted RBP23.87■■□□□ 1.41
RCCD1-208ENST00000557266 MAGEA4P43358 317 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 ASPAP45381 313 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 TFAMQ00059 246 aaKnown RBP23.87■■□□□ 1.41
RCCD1-208ENST00000557266 MAPK6Q16659 721 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 CYP4A22Q5TCH4 519 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 DLK2Q6UY11 383 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 FOXP3Q9BZS1 431 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 XYLT2Q9H1B5 865 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 KLC4Q9NSK0 619 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 HAUS2Q9NVX0 235 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 ZNF148Q9UQR1 794 aa23.87■■□□□ 1.41
RCCD1-208ENST00000557266 hCG_1818297A0A087WSY0 165 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 SNX3O60493 162 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 GH1P01241 217 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 ETS1P14921 441 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 TRPC3Q13507 836 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 STAT4Q14765 748 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 ZNF699Q32M78 642 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 TMEM63BQ5T3F8 832 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 CYP4F22Q6NT55 531 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 CCHCR1Q8TD31 782 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 FGFR1OP2Q9NVK5 253 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 PCDHGC3Q9UN70 934 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 PPME1Q9Y570 386 aa23.86■■□□□ 1.41
RCCD1-208ENST00000557266 POLR2AP24928 1970 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms