RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 GJA4P35212 333 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 AMPD2Q01433 879 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 PPP2R5CQ13362 524 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 DUOXA1Q1HG43 343 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 C2orf27AQ580R0 203 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 OLIG1Q8TAK6 271 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-220ENST00000557037 VPS54Q9P1Q0 977 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 CCL26Q9Y258 94 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 KNTC1P50748 2209 aa13.73□□□□□ -0.21
PSEN1-220ENST00000557037 PTPRDP23468 1912 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 SPTAN1Q13813 2472 aaKnown RBP13.72□□□□□ -0.21
PSEN1-220ENST00000557037 KIAA1549LQ6ZVL6 1849 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 SMIM28A0A1B0GU29 152 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 SERPINF2P08697 491 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 P2RY2P41231 377 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 ALDH1A3P47895 512 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 PRPF4BQ13523 1007 aaKnown RBP13.72□□□□□ -0.21
PSEN1-220ENST00000557037 MAEAQ7L5Y9 396 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 NAXDQ8IW45 347 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 TPH2Q8IWU9 490 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 CD101Q93033 1021 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 ADPGKQ9BRR6 497 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 SLC46A2Q9BY10 475 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 FZD8Q9H461 694 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 PRORYQ9H606 182 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 ZSWIM4Q9H7M6 989 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 CAPN10Q9HC96 672 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 GPRC5CQ9NQ84 441 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
PSEN1-220ENST00000557037 TBX20Q9UMR3 447 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 PCDH15Q96QU1 1955 aa13.72□□□□□ -0.21
PSEN1-220ENST00000557037 MYO9AB2RTY4 2548 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-220ENST00000557037 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 EDN1P05305 212 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 HNRNPLP14866 589 aaKnown RBP eCLIP13.71□□□□□ -0.21
PSEN1-220ENST00000557037 WEE1P30291 646 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 CFHR1Q03591 330 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 EPHA7Q15375 998 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 NCAPH2Q6IBW4 605 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 CCDC148Q8NFR7 591 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 CEP76Q8TAP6 659 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 USP33Q8TEY7 942 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 SPACA7Q96KW9 195 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 IGSF5Q9NSI5 407 aa13.71□□□□□ -0.21
PSEN1-220ENST00000557037 DNAAF2Q9NVR5 837 aaKnown RBP13.71□□□□□ -0.21
PSEN1-220ENST00000557037 A0A087WWV3 80 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 FAM149AA5PLN7 773 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 CAPN9O14815 690 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 PRPF3O43395 683 aaKnown RBP13.7□□□□□ -0.22
PSEN1-220ENST00000557037 DGAT1O75907 488 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 FGF19O95750 216 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 MCM4P33991 863 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 CDR1P51861 262 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 KCNC4Q03721 635 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 PEAR1Q5VY43 1037 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-220ENST00000557037 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 CC2D1AQ6P1N0 951 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-220ENST00000557037 TMEM92Q6UXU6 159 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 TMPRSS7Q7RTY8 843 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 ZBTB8OSQ8IWT0 167 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 ATAD1Q8NBU5 361 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 LSM14AQ8ND56 463 aaKnown RBP13.7□□□□□ -0.22
PSEN1-220ENST00000557037 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 APPL2Q8NEU8 664 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 BEST2Q8NFU1 509 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 RIN3Q8TB24 985 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 DDX12PQ92771 950 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 USP13Q92995 863 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-220ENST00000557037 PSMG2Q969U7 264 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 EXOC4Q96A65 974 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 SUSD3Q96L08 255 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 LPIN3Q9BQK8 851 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-220ENST00000557037 MGAQ8IWI9 3026 aa13.7□□□□□ -0.22
PSEN1-220ENST00000557037 ZNF638Q14966 1978 aaKnown RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 MARCH6O60337 910 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 MARCKSP29966 332 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 DPP6P42658 865 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 NLRP5P59047 1200 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 AKAP17AQ02040 695 aaKnown RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 BFSP1Q12934 665 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 NBR1Q14596 966 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 FAM187BQ17R55 369 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 TTC22Q5TAA0 569 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 PPP4R3AQ6IN85 833 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 CMTM8Q8IZV2 173 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 CPA6Q8N4T0 437 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 C18orf25Q96B23 403 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 ZMAT2Q96NC0 199 aaKnown RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 FCRL3Q96P31 734 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-220ENST00000557037 ECT2Q9H8V3 914 aa13.69□□□□□ -0.22
PSEN1-220ENST00000557037 BCCIPQ9P287 314 aaKnown RBP eCLIP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms