RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PCDHGC3Q9UN70 934 aa11.54□□□□□ -0.56
LINC01550-206ENST00000556462 PCDHGC5Q9Y5F6 944 aa11.54□□□□□ -0.56
LINC01550-206ENST00000556462 CTAGE9A4FU28 777 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CXCL10P02778 98 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CYP2C18P33260 490 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 GPC5P78333 572 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 UPP1Q16831 310 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 SV2CQ496J9 727 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 NAA35Q5VZE5 725 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 PASD1Q8IV76 773 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 C3orf58Q8NDZ4 430 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 KBTBD7Q8WVZ9 684 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 RFFLQ8WZ73 363 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 NT5C1AQ9BXI3 368 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 PPP1R12CQ9BZL4 782 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 PDCL3Q9H2J4 239 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 NCANO14594 1321 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CASTOR2A6NHX0 329 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 PODXLO00592 558 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 ENC1O14682 589 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 PALMO75781 387 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 URI1O94763 535 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 RPL9P32969 192 aaKnown RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CDH5P33151 784 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 NAP1L1P55209 391 aaKnown RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 GRIK3Q13003 919 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 TCEAL1Q15170 157 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 LRRC26Q2I0M4 334 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CLLU1OSQ5K130 101 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 FAM43BQ6ZT52 329 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 DPH6Q7L8W6 267 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 MCOLN2Q8IZK6 566 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CRIPAKQ8N1N5 446 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 TPCN2Q8NHX9 752 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 SEPT8Q92599 483 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 RABGGTAQ92696 567 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 APBB2Q92870 758 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 NAPGQ99747 312 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 CHORDC1Q9UHD1 332 aaPredicted RBP11.53□□□□□ -0.56
LINC01550-206ENST00000556462 L1RE1Q9UN81 338 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 COG5Q9UP83 839 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 ATP11BQ9Y2G3 1177 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 INPP5FQ9Y2H2 1132 aa11.53□□□□□ -0.56
LINC01550-206ENST00000556462 MYH10P35580 1976 aa11.52□□□□□ -0.56
LINC01550-206ENST00000556462 GRID2IPA4D2P6 1211 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.57
LINC01550-206ENST00000556462 ATP1A1P05023 1023 aaKnown RBP11.52□□□□□ -0.57
LINC01550-206ENST00000556462 FGFR1P11362 822 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 VDRP11473 427 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 CD19P15391 556 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 NOP2P46087 812 aaKnown RBP11.52□□□□□ -0.57
LINC01550-206ENST00000556462 PTP4A2Q12974 167 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 MON1BQ7L1V2 547 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 LRRC57Q8N9N7 239 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 HEXIM2Q96MH2 286 aaKnown RBP11.52□□□□□ -0.57
LINC01550-206ENST00000556462 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.57
LINC01550-206ENST00000556462 TMEM161AQ9NX61 479 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 GTF3C4Q9UKN8 822 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 JRKLQ9Y4A0 524 aa11.52□□□□□ -0.57
LINC01550-206ENST00000556462 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 O00370 1275 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 RIOK3O14730 519 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 HCRTO43612 131 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 HUS1O60921 280 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 CYP1A2P05177 515 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 LMO2P25791 158 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 NSFP46459 744 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 AARSP49588 968 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 HADHBP55084 474 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 AMPD2Q01433 879 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 TUSC3Q13454 348 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 CNGA2Q16280 664 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 C2CD6Q53TS8 623 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 PAPD7Q5XG87 772 aaKnown RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 CD300LGQ6UXG3 332 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 SLFN11Q7Z7L1 901 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 UNC93AQ86WB7 457 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 PHF13Q86YI8 300 aaPredicted RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 RHOT2Q8IXI1 618 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 PDCL2Q8N4E4 241 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 TOP6BLQ8N6T0 577 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 C12orf29Q8N999 325 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 APPL2Q8NEU8 664 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 OR6B3Q8NGW1 331 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 ALS2CR12Q96Q35 445 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 LHX5Q9H2C1 402 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 TMEM39AQ9NV64 488 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 KIAA1257Q9ULG3 409 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 CYB561D2O14569 222 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 GABRDO14764 452 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 ATMINO43313 823 aaPredicted RBP11.51□□□□□ -0.57
LINC01550-206ENST00000556462 MED7O43513 233 aa11.51□□□□□ -0.57
LINC01550-206ENST00000556462 B4GALT3O60512 393 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms