RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MFSD6LQ8IWD5 586 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 SYCP3Q8IZU3 236 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 PSMG2Q969U7 264 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 SAAL1Q96ER3 474 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 OLFML3Q9NRN5 406 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 PANK4Q9NVE7 773 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 HSFX1Q9UBD0 423 aa24.41■■□□□ 1.5
ACTN1-220ENST00000556433 SHISA7A6NL88 538 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 CASP5P51878 434 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 STK38Q15208 465 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 WSCD1Q658N2 575 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 ITIH5Q86UX2 942 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 GPIHBP1Q8IV16 184 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 PDILTQ8N807 584 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 ZSWIM2Q8NEG5 633 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 FAM200AQ8TCP9 573 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 E2F7Q96AV8 911 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 BORCS6Q96GS4 357 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 SEPT5Q99719 369 aaPredicted RBP24.4■■□□□ 1.5
ACTN1-220ENST00000556433 TRPV5Q9NQA5 729 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 FBXO4Q9UKT5 387 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 NDRG2Q9UN36 371 aaKnown RBP24.4■■□□□ 1.5
ACTN1-220ENST00000556433 DMDP11532 3685 aa24.4■■□□□ 1.5
ACTN1-220ENST00000556433 MIA3Q5JRA6 1907 aa24.39■■□□□ 1.5
ACTN1-220ENST00000556433 SCN1AP35498 2009 aa24.39■■□□□ 1.5
ACTN1-220ENST00000556433 KPNA7A9QM74 516 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 LDHAP00338 332 aaKnown RBP24.39■■□□□ 1.49
ACTN1-220ENST00000556433 GARTP22102 1010 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 NASPP49321 788 aaPredicted RBP24.39■■□□□ 1.49
ACTN1-220ENST00000556433 TFAMQ00059 246 aaKnown RBP24.39■■□□□ 1.49
ACTN1-220ENST00000556433 CSTF1Q05048 431 aaKnown RBP24.39■■□□□ 1.49
ACTN1-220ENST00000556433 FZD5Q13467 585 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 ALCAMQ13740 583 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 MGAT5BQ3V5L5 792 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 SV2CQ496J9 727 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 GAREM2Q75VX8 874 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 YAF2Q8IY57 180 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 ATXN3LQ9H3M9 355 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 F5P12259 2224 aa24.39■■□□□ 1.49
ACTN1-220ENST00000556433 FRMD3A2A2Y4 597 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 FGF19O95750 216 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 GABRR2P28476 465 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 RPS9P46781 194 aaKnown RBP24.38■■□□□ 1.49
ACTN1-220ENST00000556433 WNT7BP56706 349 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 ZNF528Q3MIS6 628 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 STXBP5Q5T5C0 1151 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 LRRTM3Q86VH5 581 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 ARID3BQ8IVW6 561 aaPredicted RBP24.38■■□□□ 1.49
ACTN1-220ENST00000556433 BRSK2Q8IWQ3 736 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 CACTINQ8WUQ7 758 aaKnown RBP24.38■■□□□ 1.49
ACTN1-220ENST00000556433 RSPRY1Q96DX4 576 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 LPIN3Q9BQK8 851 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 FGFBP2Q9BYJ0 223 aa24.38■■□□□ 1.49
ACTN1-220ENST00000556433 TFIP11Q9UBB9 837 aaKnown RBP24.38■■□□□ 1.49
ACTN1-220ENST00000556433 NCANO14594 1321 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 GOLGA8IPA6NC78 632 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 GOLGA8JA6NMD2 632 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 PRPF6O94906 941 aaKnown RBP24.37■■□□□ 1.49
ACTN1-220ENST00000556433 SMARCB1Q12824 385 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 VEPH1Q14D04 833 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 CCDC65Q8IXS2 484 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 LINC00301Q8NCQ3 95 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 NOC3LQ8WTT2 800 aaKnown RBP24.37■■□□□ 1.49
ACTN1-220ENST00000556433 C2orf15Q8WU43 125 aaKnown RBP24.37■■□□□ 1.49
ACTN1-220ENST00000556433 FAM3CQ92520 227 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 ZNF560Q96MR9 790 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 PCIF1Q9H4Z3 704 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 TMEM206Q9H813 350 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 RBAKQ9NYW8 714 aaPredicted RBP24.37■■□□□ 1.49
ACTN1-220ENST00000556433 AGAP1Q9UPQ3 857 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 PIAS3Q9Y6X2 628 aa24.37■■□□□ 1.49
ACTN1-220ENST00000556433 EP300Q09472 2414 aaPredicted RBP24.37■■□□□ 1.49
ACTN1-220ENST00000556433 ANK1P16157 1881 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 SPTLC2O15270 562 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 POLR2BP30876 1174 aaKnown RBP24.36■■□□□ 1.49
ACTN1-220ENST00000556433 PNPLA4P41247 253 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 TAF12Q16514 161 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 ARHGAP15Q53QZ3 475 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 GPR158Q5T848 1215 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 DCP1BQ8IZD4 617 aaKnown RBP24.36■■□□□ 1.49
ACTN1-220ENST00000556433 ZNF687Q8N1G0 1237 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 SPPL2BQ8TCT7 592 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 CBWD1Q9BRT8 395 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 CFAP54Q96N23 3096 aa24.36■■□□□ 1.49
ACTN1-220ENST00000556433 GVINP1Q7Z2Y8 2422 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 VPS13AQ96RL7 3174 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 DPYSL4O14531 572 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 EXTL3O43909 919 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 KINO60870 393 aaKnown RBP24.35■■□□□ 1.49
ACTN1-220ENST00000556433 ITGB3P05106 788 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 HAPLN1P10915 354 aaPredicted RBP24.35■■□□□ 1.49
ACTN1-220ENST00000556433 ATF6P18850 670 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 C1orf127Q8N9H9 656 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 CSGALNACT1Q8TDX6 532 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 GIPC2Q8TF65 315 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 ZNF396Q96N95 335 aaPredicted RBP24.35■■□□□ 1.49
ACTN1-220ENST00000556433 MKNK1Q9BUB5 465 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 LRRC27Q9C0I9 530 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 LMAN1LQ9HAT1 526 aa24.35■■□□□ 1.49
ACTN1-220ENST00000556433 ABI2Q9NYB9 513 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms