RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-206ENST00000556375 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
SLIRP-206ENST00000556375 SORCS3Q9UPU3 1222 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 YIPF1Q9Y548 306 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 SNX9Q9Y5X1 595 aa12.4□□□□□ -0.42
SLIRP-206ENST00000556375 ZFP37Q9Y6Q3 630 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-206ENST00000556375 FAM86C2PA6NEL3 165 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 LRRIQ3A6PVS8 624 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-206ENST00000556375 MAPK13O15264 365 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 GADD45BO75293 160 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-206ENST00000556375 ASGR2P07307 311 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 RHOP08100 348 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 NR2F2P24468 414 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 CASP4P49662 377 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 AP3M2P53677 418 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 CLDN10P78369 228 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 TWF1Q12792 350 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 SMARCB1Q12824 385 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 PLD1Q13393 1074 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 COBLL1Q53SF7 1204 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 ZNF658Q5TYW1 1059 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-206ENST00000556375 SCARA3Q6AZY7 606 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 CENPPQ6IPU0 288 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 ADGRF2Q8IZF7 708 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 ELMOD1Q8N336 334 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 TOP6BLQ8N6T0 577 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 GTPBP4Q9BZE4 634 aaKnown RBP12.39□□□□□ -0.43
SLIRP-206ENST00000556375 CRISPLD1Q9H336 500 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 LIMD1Q9UGP4 676 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 MAPK8IP1Q9UQF2 711 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 FRMD4BQ9Y2L6 1034 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 PTPRDP23468 1912 aa12.39□□□□□ -0.43
SLIRP-206ENST00000556375 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
SLIRP-206ENST00000556375 LAMP2P13473 410 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 RPL13P26373 211 aaKnown RBP12.38□□□□□ -0.43
SLIRP-206ENST00000556375 MYL7Q01449 175 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 TSPY1Q01534 308 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 SIGLEC14Q08ET2 396 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 DUSP4Q13115 394 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 TRIM67Q6ZTA4 783 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 DPH6Q7L8W6 267 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 UBALD2Q8IYN6 164 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 SMYD4Q8IYR2 804 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-206ENST00000556375 DCP1BQ8IZD4 617 aaKnown RBP12.38□□□□□ -0.43
SLIRP-206ENST00000556375 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 LEMD2Q8NC56 503 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 ITFG1Q8TB96 612 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 TMC2Q8TDI7 906 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 C2orf15Q8WU43 125 aaKnown RBP12.38□□□□□ -0.43
SLIRP-206ENST00000556375 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
SLIRP-206ENST00000556375 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 CDH7Q9ULB5 785 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
SLIRP-206ENST00000556375 GABRDO14764 452 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 AKAP3O75969 853 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 PTPN2P17706 415 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 PCSK1P29120 753 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ATICP31939 592 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 LHX1P48742 406 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 EPHA5P54756 1037 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 UBE2HP62256 183 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ENPEPQ07075 957 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 BIRC3Q13489 604 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 TRPC3Q13507 836 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 NFE2Q16621 373 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 SLC5A9Q2M3M2 681 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 SOWAHAQ2M3V2 549 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 INTS6LQ5JSJ4 861 aaKnown RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 TDRD10Q5VZ19 366 aaKnown RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 IQCEQ6IPM2 695 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 NPAS3Q8IXF0 933 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 SPPL2BQ8TCT7 592 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ERCC4Q92889 916 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 FGF13Q92913 245 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 NXPE3Q969Y0 559 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 CORO1BQ9BR76 489 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 LRFN3Q9BTN0 628 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 DNAJC25Q9H1X3 360 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 KCNK12Q9HB15 430 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 CEP72Q9P209 647 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 MRPS23Q9Y3D9 190 aaKnown RBP12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
SLIRP-206ENST00000556375 OBSL1O75147 1896 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms