RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 MYCBPAPQ8TBZ2 947 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 VKORC1Q9BQB6 163 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 SLAMF7Q9NQ25 335 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 ENTPD2Q9Y5L3 495 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 TNFRSF18Q9Y5U5 241 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 CEP164Q9UPV0 1460 aa6.57□□□□□ -1.36
PRPF39-209ENST00000556353 URB2Q14146 1524 aaKnown RBP6.56□□□□□ -1.36
PRPF39-209ENST00000556353 FANCD2Q9BXW9 1451 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 LRRC14BA6NHZ5 514 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 LRRC3CA6NJW4 275 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 CHEK2O96017 543 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 CHRM2P08172 466 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 PIK3CGP48736 1102 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 NXPH1P58417 271 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 ZKSCAN2Q63HK3 967 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 POC1BQ8TC44 478 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 PCDHA3Q9Y5H8 950 aa6.56□□□□□ -1.36
PRPF39-209ENST00000556353 SPATA31A3Q5VYP0 1347 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 ADM5C9JUS6 153 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 SLC16A6O15403 523 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 PDCP20941 246 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 LPOP22079 712 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-209ENST00000556353 PRDX5P30044 214 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 ZNF135P52742 658 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-209ENST00000556353 HABP2Q14520 560 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-209ENST00000556353 TXNRD1Q16881 649 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 SLC30A10Q6XR72 485 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 FAM9AQ8IZU1 332 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-209ENST00000556353 TIMP4Q99727 224 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 CNPPD1Q9BV87 410 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 WDCPQ9H6R7 721 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 GPR35Q9HC97 309 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 CPNE5Q9HCH3 593 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 HOMER2Q9NSB8 354 aa6.55□□□□□ -1.36
PRPF39-209ENST00000556353 ARPP21Q9UBL0 812 aaPredicted RBP6.55□□□□□ -1.36
PRPF39-209ENST00000556353 A0A0B4J269 797 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 F5H697 171 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 TRIAP1O43715 76 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 RARBP10826 455 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 LMO1P25800 156 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 NDUFV1P49821 464 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 HNRNPMP52272 730 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRPF39-209ENST00000556353 NOGQ13253 232 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 TUBB3Q13509 450 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 FBXO41Q8TF61 875 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 RGMAQ96B86 450 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 KLC4Q9NSK0 619 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 ETAA1Q9NY74 926 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 FEZ2Q9UHY8 353 aaPredicted RBP6.54□□□□□ -1.36
PRPF39-209ENST00000556353 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRPF39-209ENST00000556353 NR2E3Q9Y5X4 410 aa6.54□□□□□ -1.36
PRPF39-209ENST00000556353 SOAT2O75908 522 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 WT1P19544 449 aaPredicted RBP6.53□□□□□ -1.36
PRPF39-209ENST00000556353 GPD1P21695 349 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 PHKA1P46020 1223 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 HK3P52790 923 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 KIF22Q14807 665 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 TMEM240Q5SV17 173 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 TSTD2Q5T7W7 516 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 USP45Q70EL2 814 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 HEATR3Q7Z4Q2 680 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 FAM90A1Q86YD7 464 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 PSD4Q8NDX1 1056 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 TNPO1Q92973 898 aaKnown RBP6.53□□□□□ -1.36
PRPF39-209ENST00000556353 SARAFQ96BY9 339 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 TPSD1Q9BZJ3 242 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 ABCF2Q9UG63 623 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 ZDHHC8Q9ULC8 765 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 FRMD4BQ9Y2L6 1034 aa6.53□□□□□ -1.36
PRPF39-209ENST00000556353 PRSS29PA6NIE9 313 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 LINC00473A8K010 186 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 RBMXL2O75526 392 aaKnown RBP6.52□□□□□ -1.37
PRPF39-209ENST00000556353 IL33O95760 270 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 FTLP02792 175 aaPredicted RBP6.52□□□□□ -1.37
PRPF39-209ENST00000556353 GNAI2P04899 355 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 SOX10P56693 466 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 TAF2Q6P1X5 1199 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 PRR18Q8N4B5 295 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 OSBPL9Q96SU4 736 aa6.52□□□□□ -1.37
PRPF39-209ENST00000556353 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
PRPF39-209ENST00000556353 ADGRA2Q96PE1 1338 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 WDR27A2RRH5 827 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 URI1O94763 535 aaPredicted RBP6.51□□□□□ -1.37
PRPF39-209ENST00000556353 POU2F2P09086 479 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 ELFN1P0C7U0 828 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 CDK4P11802 303 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 ITGALP20701 1170 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 FAM153CQ494X1 144 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 ZBTB46Q86UZ6 589 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 CPA6Q8N4T0 437 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 DDX17Q92841 729 aaKnown RBP6.51□□□□□ -1.37
PRPF39-209ENST00000556353 CHMP4CQ96CF2 233 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 PBKQ96KB5 322 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 HAPLN3Q96S86 360 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 ALG8Q9BVK2 526 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 TINAGL1Q9GZM7 467 aaPredicted RBP6.51□□□□□ -1.37
PRPF39-209ENST00000556353 SMOC2Q9H3U7 446 aa6.51□□□□□ -1.37
PRPF39-209ENST00000556353 LMBRD1Q9NUN5 540 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms