RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CYP11B1P15538 503 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CLCN1P35523 988 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SLC11A1P49279 550 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 GATMP50440 423 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 NDST1P52848 882 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SLC8A3P57103 927 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SNX16P57768 344 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 HTRA4P83105 476 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 TSPY1Q01534 308 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CDR2Q01850 454 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SOWAHAQ2M3V2 549 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 TIGD5Q53EQ6 642 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 OVOS1Q6IE37 1185 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 KCNT2Q6UVM3 1135 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 PDCL2Q8N4E4 241 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 UBR7Q8N806 425 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 MSANTD4Q8NCY6 345 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 TMEM169Q96HH4 297 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 RNPC3Q96LT9 517 aaKnown RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF830Q96NB3 372 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 ARID3AQ99856 593 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 MRPL45Q9BRJ2 306 aaKnown RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 UBE2OQ9C0C9 1292 aaKnown RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 SPG21Q9NZD8 308 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 HESX1Q9UBX0 185 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 AJAP1Q9UKB5 411 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-218ENST00000556343 CDH9Q9ULB4 789 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 TANC1Q9C0D5 1861 aa9.82□□□□□ -0.84
ACTN1-218ENST00000556343 EIF3CLB5ME19 914 aaKnown RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 NDUFA10O95299 355 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 MSNP26038 577 aaKnown RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 MAGEA10P43363 369 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 BRCC3P46736 316 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 RAP1GAPP47736 663 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 KIF11P52732 1056 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF132P52740 706 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 EPHB4P54760 987 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 YWHAHQ04917 246 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 CNGA2Q16280 664 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 USP41Q3LFD5 358 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF394Q53GI3 561 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 WSCD1Q658N2 575 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 KIAA1841Q6NSI8 718 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 FUT10Q6P4F1 479 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 WDR59Q6PJI9 974 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 LIMS2Q7Z4I7 341 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 SLC47A2Q86VL8 602 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 DCP1BQ8IZD4 617 aaKnown RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 CRYBG2Q8N1P7 616 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 TET1Q8NFU7 2136 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 HASPINQ8TF76 798 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ELMO3Q96BJ8 720 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 SAMD11Q96NU1 681 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 NOX5Q96PH1 765 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 EIF3CQ99613 913 aaKnown RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 CHP1Q99653 195 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ACBD6Q9BR61 282 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 PAAF1Q9BRP4 392 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 MIS12Q9H081 205 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 SDCBP2Q9H190 292 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 CWH43Q9H720 699 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 DDX43Q9NXZ2 648 aaKnown RBP9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ARHGAP20Q9P2F6 1191 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 DNAJB4Q9UDY4 337 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ADAMTS1Q9UHI8 967 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 L1RE1Q9UN81 338 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 STXBP5LQ9Y2K9 1186 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 RALGAPA2Q2PPJ7 1873 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 ATP8B3O60423 1300 aa9.81□□□□□ -0.84
ACTN1-218ENST00000556343 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 GOLGA6L9A6NEM1 432 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 SOWAHDA6NJG2 315 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 OR6C75A6NL08 312 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 GABRDO14764 452 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 LSM8O95777 96 aaKnown RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 PDGFRBP09619 1106 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 CCDC175P0C221 793 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 GZMAP12544 262 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 PTPN1P18031 435 aaKnown RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 RAD23BP54727 409 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 CCZ1BP86790 482 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 CCZ1P86791 482 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 SMARCB1Q12824 385 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 SLC18A3Q16572 532 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 CCDC122Q5T0U0 273 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 FAM171A1Q5VUB5 890 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 HGSNATQ68CP4 663 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 SCARA3Q6AZY7 606 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF280DQ6N043 979 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 C4orf50Q6ZRC1 276 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 ANKS3Q6ZW76 656 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 ZNF571Q7Z3V5 609 aaPredicted RBP9.8□□□□□ -0.84
ACTN1-218ENST00000556343 KIAA1328Q86T90 577 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 CEP57Q86XR8 500 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 COLGALT1Q8NBJ5 622 aa9.8□□□□□ -0.84
ACTN1-218ENST00000556343 SLC4A11Q8NBS3 891 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms