RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 SLC39A12Q504Y0 691 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
ACTN1-217ENST00000556203 GET4Q7L5D6 327 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-217ENST00000556203 ADGRF2Q8IZF7 708 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 ZDHHC14Q8IZN3 488 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 ADSSL1Q8N142 457 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 TMEM86AQ8N2M4 240 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 ATAD1Q8NBU5 361 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 HCFC1R1Q9NWW0 138 aa16.32■□□□□ 0.2
ACTN1-217ENST00000556203 DNMT3BQ9UBC3 853 aaKnown RBP16.32■□□□□ 0.2
ACTN1-217ENST00000556203 SCN1AP35498 2009 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 MAPK13O15264 365 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 N4BP1O75113 896 aaKnown RBP16.31■□□□□ 0.2
ACTN1-217ENST00000556203 ALADP13716 330 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 FSHRP23945 695 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 GBP2P32456 591 aaPredicted RBP16.31■□□□□ 0.2
ACTN1-217ENST00000556203 PSMC2P35998 433 aaKnown RBP16.31■□□□□ 0.2
ACTN1-217ENST00000556203 VAMP7P51809 220 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 CDR1P51861 262 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 PMS1P54277 932 aaKnown RBP16.31■□□□□ 0.2
ACTN1-217ENST00000556203 MYL6P60660 151 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 DUSP4Q13115 394 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 SOWAHAQ2M3V2 549 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 CENPPQ6IPU0 288 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 CLEC17AQ6ZS10 378 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
ACTN1-217ENST00000556203 LRRTM3Q86VH5 581 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 OSTM1Q86WC4 334 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 FAM186BQ8IYM0 893 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 PLCD3Q8N3E9 789 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 EEF2KMTQ96G04 330 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 TSG101Q99816 390 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 CRISPLD1Q9H336 500 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 DDX43Q9NXZ2 648 aaKnown RBP16.31■□□□□ 0.2
ACTN1-217ENST00000556203 LIMD1Q9UGP4 676 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 SLC27A5Q9Y2P5 690 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 YIPF1Q9Y548 306 aa16.31■□□□□ 0.2
ACTN1-217ENST00000556203 BIN1O00499 593 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 PSMA7O14818 248 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 CETN3O15182 167 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 C4BPAP04003 597 aaKnown RBP16.3■□□□□ 0.2
ACTN1-217ENST00000556203 RHOP08100 348 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 KRT13P13646 458 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 ACAT1P24752 427 aaKnown RBP16.3■□□□□ 0.2
ACTN1-217ENST00000556203 LHX1P48742 406 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 MYL7Q01449 175 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 TSPY1Q01534 308 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 STIM1Q13586 685 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 CAMK4Q16566 473 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 PABPC1LQ4VXU2 614 aaKnown RBP16.3■□□□□ 0.2
ACTN1-217ENST00000556203 ANKRD40Q6AI12 368 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 DPH6Q7L8W6 267 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 DCP1BQ8IZD4 617 aaKnown RBP16.3■□□□□ 0.2
ACTN1-217ENST00000556203 TTC9BQ8N6N2 239 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 SPATA18Q8TC71 538 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 SYAP1Q96A49 352 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-217ENST00000556203 MYADMQ96S97 322 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 MMS19Q96T76 1030 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 ACBD6Q9BR61 282 aa16.3■□□□□ 0.2
ACTN1-217ENST00000556203 TRIM49BA6NDI0 452 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 GABRDO14764 452 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 IKBKBO14920 756 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 HCRTO43612 131 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 CLSTN1O94985 981 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 STAU1O95793 577 aaKnown RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 ASGR2P07307 311 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 TRIM49P0CI25 452 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 TRIM49CP0CI26 452 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 BMP6P22004 513 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 ATICP31939 592 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 TNNC1P63316 161 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 PLD1Q13393 1074 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 NCOA4Q13772 614 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 MORC3Q14149 939 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 WDR72Q3MJ13 1102 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 ZACNQ401N2 412 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 INTS6LQ5JSJ4 861 aaKnown RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 C1orf220Q5T0J3 134 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 SV2AQ7L0J3 742 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 ELMOD1Q8N336 334 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 ITFG1Q8TB96 612 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 KBTBD7Q8WVZ9 684 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 DHTKD1Q96HY7 919 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 SEPT5Q99719 369 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 CORO1BQ9BR76 489 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 MKNK1Q9BUB5 465 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 XYLT2Q9H1B5 865 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 TMLHEQ9NVH6 421 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.29■□□□□ 0.23e-6■■■□□ 18.8
ACTN1-217ENST00000556203 CEP72Q9P209 647 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 NXF1Q9UBU9 619 aaKnown RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 MTCL1Q9Y4B5 1905 aaKnown RBP16.29■□□□□ 0.2
ACTN1-217ENST00000556203 TSC2P49815 1807 aa16.29■□□□□ 0.2
ACTN1-217ENST00000556203 C5orf42Q9H799 3197 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 SOAT2O75908 522 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms