RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SPATA18Q8TC71 538 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 CDCA3Q99618 268 aaPredicted RBP15.16■□□□□ 0.02
SNX6-206ENST00000556162 CLSTN3Q9BQT9 956 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 IGFLR1Q9H665 355 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 FBXL5Q9UKA1 691 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 CDY1Q9Y6F8 540 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 GTPBP10A4D1E9 387 aaKnown RBP15.16■□□□□ 0.02
SNX6-206ENST00000556162 TACC1O75410 805 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 OR1D2P34982 312 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 DUSP6Q16828 381 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 GBP6Q6ZN66 633 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 PPFIBP1Q86W92 1011 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 GLYCTKQ8IVS8 523 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 FAXDC2Q96IV6 333 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 NIF3L1Q9GZT8 377 aa15.16■□□□□ 0.02
SNX6-206ENST00000556162 APOBEC3GQ9HC16 384 aaKnown RBP15.16■□□□□ 0.02
SNX6-206ENST00000556162 FSD2A1L4K1 749 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 OR6C75A6NL08 312 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 NCK2O43639 380 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 TBC1D4O60343 1298 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 CLASP2O75122 1294 aaKnown RBP15.15■□□□□ 0.02
SNX6-206ENST00000556162 GNL1P36915 607 aaPredicted RBP15.15■□□□□ 0.02
SNX6-206ENST00000556162 COPB1P53618 953 aaKnown RBP15.15■□□□□ 0.02
SNX6-206ENST00000556162 LRMPQ12912 555 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 CCDC85BQ15834 202 aaPredicted RBP15.15■□□□□ 0.02
SNX6-206ENST00000556162 EXOC3L4Q17RC7 722 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 SLC8B1Q6J4K2 584 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 SCARA5Q6ZMJ2 495 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 TATDN2Q93075 761 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 CRACR2AQ9BSW2 395 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 SNX25Q9H3E2 840 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 DDX43Q9NXZ2 648 aaKnown RBP15.15■□□□□ 0.02
SNX6-206ENST00000556162 GCNT4Q9P109 453 aa15.15■□□□□ 0.02
SNX6-206ENST00000556162 GABRDO14764 452 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 WARSP23381 471 aaKnown RBP15.14■□□□□ 0.01
SNX6-206ENST00000556162 ASPAP45381 313 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 CDH8P55286 799 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 ARPP19P56211 112 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 HYAL1Q12794 435 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 RAB33AQ14088 237 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 RSPO2Q6UXX9 243 aaPredicted RBP15.14■□□□□ 0.01
SNX6-206ENST00000556162 PALB2Q86YC2 1186 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 OR6B3Q8NGW1 331 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 LMO3Q8TAP4 145 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 KBTBD7Q8WVZ9 684 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 PPM1EQ8WY54 764 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 NT5C1BQ96P26 610 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 ACBD6Q9BR61 282 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 MRPL45Q9BRJ2 306 aaKnown RBP15.14■□□□□ 0.01
SNX6-206ENST00000556162 INTS2Q9H0H0 1204 aaKnown RBP15.14■□□□□ 0.01
SNX6-206ENST00000556162 SMYD3Q9H7B4 428 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 CYP3A43Q9HB55 503 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 VWA8A3KMH1 1905 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 ADAM12O43184 909 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 PCSK1P29120 753 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 FKBP15Q5T1M5 1219 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 STXBP5LQ9Y2K9 1186 aa15.14■□□□□ 0.01
SNX6-206ENST00000556162 EYSQ5T1H1 3165 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 GLUD1P00367 558 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 C1RP00736 705 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 CPB1P15086 417 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 SLC9A1P19634 815 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 GTF2F1P35269 517 aaKnown RBP eCLIP15.13■□□□□ 0.01
SNX6-206ENST00000556162 RAP1GAPP47736 663 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 CLCN4P51793 760 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 TSPY1Q01534 308 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 ROR1Q01973 937 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 FILIP1LQ4L180 1135 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 OSTM1Q86WC4 334 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 RNF214Q8ND24 703 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 OR10T2Q8NGX3 314 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 RTP3Q9BQQ7 232 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 BCO2Q9BYV7 579 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 HCFC2Q9Y5Z7 792 aa15.13■□□□□ 0.01
SNX6-206ENST00000556162 A8MXQ7 604 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 TGM5O43548 720 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 SERPINC1P01008 464 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 PDGFRBP09619 1106 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 SRGAP2BP0DMP2 458 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 TBXAS1P24557 533 aaPredicted RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 ACAT1P24752 427 aaKnown RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 LMO2P25791 158 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 PON1P27169 355 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 CUL2Q13617 745 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 SKIV2LQ15477 1246 aaKnown RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 LLGL2Q6P1M3 1020 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 TRIM65Q6PJ69 517 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 APTXQ7Z2E3 356 aaKnown RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 DCP1BQ8IZD4 617 aaKnown RBP15.12■□□□□ 0.01
SNX6-206ENST00000556162 PPM1KQ8N3J5 372 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 TTC39CQ8N584 583 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 ZNF461Q8TAF7 563 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 SDCBP2Q9H190 292 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 DPP7Q9UHL4 492 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 REV3LO60673 3130 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 LGALS16A8MUM7 142 aa15.12■□□□□ 0.01
SNX6-206ENST00000556162 OR4Q2P0C623 313 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms